Gene PCC8801_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0004 
Symbol 
ID7103680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3059 
End bp4111 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content32% 
IMG OID643473120 
Productdiguanylate cyclase 
Protein accessionYP_002370267 
Protein GI218244896 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACTG ATAATCATCC CTTGCATATT TTGGTCATTG AAGATAAAAA ATATAGACAA 
ACAATCTCTT TAGAGAAAAA AATCTATTCC CTTGGGAGAC ATCCCAATAA TTCAATTCTT 
ATTTGTGATC AAAAAGCTTC TCGATATCAT GCTACTCTAA TGCGTCGTCA AAAAGATTAT 
AATGGTCATT ATTCCTATTG GATTGTCGAT GGAGATATGC AAGGCAATAA AAGTCTTAAT 
GGGATCTATG TTAATGGAGA AAAATGTTTA GCAAAAGAAC TCAAAAATGG AGACTTAATT 
AACTTTGGAT GTCAAGTTAA CGCTACCTAT CATGCGCTTA CTGATTGGTC AAATACAATT 
GTTGATATTG ACAAAATAAA ATTCGATCCT TTCTCCAAAC AATCTCTTGA TTTAGAAGCA 
GCGCATACCC CAACTTTAAC AGCTATGTCG TCAATCCAAA ATAATCACAT TTCTGGAGGA 
TTTTTGCCTA ATCATCTCAA TTCTTATCAA TCTAATGCGA GTAATACTGA AGAAACTATC 
TTGCCAGATA ATCGTCACGA TCCTTTAACA CAATTACCTA ATCAGTTTCT GTTTAGTGAG 
CGTCTATCCT TAACTCTTAA AAATGCTCAA CAAAATAATT CTTTAATGGC TGTTGGTCTA 
TTAACTATTA ATCACTTCGA TCATATTTAT GAAGATTTTG GGTGTCCAAT AGCAGAACAA 
TTATTACAAG AAATTGCTCA AACATTAAAT TCTAGCGTTC GTTATGATGA TCTTGTTGCT 
CGCCTAGGAA AAAATGAGTT TGGCTTTATT TTTTCTAAAA TTCGTTACGC CCAAGATCGA 
GAAATAATAT GTGAAAAACT TCTTAACTCT GTAGCTCAAT CTTTTACATT ATCAGGCAAT 
CAATTACAAT TAAGTGCCAA TATAGGCATC GCACTTTACC CCCACGATGG TCTTAATACA 
GAAACCCTTT TACAACAAGC AAAAGTAATT TTACTTAATG ATTACAAGCA AGATCAAGAT 
GTTCATAAAA ATCCTGCTTT TTTAACTTGT TAA
 
Protein sequence
MNTDNHPLHI LVIEDKKYRQ TISLEKKIYS LGRHPNNSIL ICDQKASRYH ATLMRRQKDY 
NGHYSYWIVD GDMQGNKSLN GIYVNGEKCL AKELKNGDLI NFGCQVNATY HALTDWSNTI 
VDIDKIKFDP FSKQSLDLEA AHTPTLTAMS SIQNNHISGG FLPNHLNSYQ SNASNTEETI 
LPDNRHDPLT QLPNQFLFSE RLSLTLKNAQ QNNSLMAVGL LTINHFDHIY EDFGCPIAEQ 
LLQEIAQTLN SSVRYDDLVA RLGKNEFGFI FSKIRYAQDR EIICEKLLNS VAQSFTLSGN 
QLQLSANIGI ALYPHDGLNT ETLLQQAKVI LLNDYKQDQD VHKNPAFLTC