| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A5076 |
|---|
| Symbol | dapF |
|---|
| ID | 7098437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | - |
|---|
| Start bp | 4893848 |
|---|
| End bp | 4894714 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643472584 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_002369736 |
|---|
| Protein GI | 218233484 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGCA ATAGTTATAT ATATGTAAAT
ATGTTTGAAG AGCAAATTCC TGAAGAAGAT TTAGCCCTTG TGGCGGAAAA GGTTTCAAAT
ATTAATACTG GTATTGGAGC AGACGGGATG ATTTTAATTT GCCCTTCAGA CGTAGCTCCG
GTGAAAATGC GCATGTTTAA TAATGATGGT TCTGAAGGAA AGAGCTGTGG TAACGGTTTA
CGCTGCGTAG CGAAATATGC GTATGAACAT AAACTAGTAG AAGAAACAGT TTTTACAATT
GAAACGTTGG CTGGTATTGT AACGGCTGAA GTAACAGTAG AAGATGGTGT CGTGACATTA
GCGAAAATCG ATATGGGAGC ACCGCGTCTA ACACGTGCAG AAATACCGAT GCTTGGTGAA
GGTGAAACAC CATTTATTCG TGAAAACTTC TTATACAATA ATCATCGTTA TGCATTTACA
GCTGTTTCAA TGGGAAATCC ACATGCGGTT ATTTTTGTTG ATGATGTAGA AAAAGCACCT
CTTACAACAC TTGGACCAGT CCTCGAGACA CATGAAATGT TTCCAGAGCG AGTAAATGTT
GAGTTTATCG AAATTTTGAA TGATGACGAG ATGAACTTCC GCGTTTGGGA ACGTGGGTCT
GGTGTAACGC AAGCTTGCGG AACAGGGGCG TGCGCTGCAG TTGTAGCTGC TATTTTAAAT
GGAAAGATGG AACGTGGTAA GGAAATTACA GTCCATTTAG CTGGTGGCGA TTTAATGATT
GCGTGGACTG AAGAAGGAAA CGTGTTGATG AAAGGACCTG CGGAAGTAAT TTGCCGCGGA
GTGTATGAGT ACAAGATAGA AGCGTAA
|
|---|
| Protein sequence | MSQFSFTKMH GLGNSYIYVN MFEEQIPEED LALVAEKVSN INTGIGADGM ILICPSDVAP
VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEETVFTI ETLAGIVTAE VTVEDGVVTL
AKIDMGAPRL TRAEIPMLGE GETPFIRENF LYNNHRYAFT AVSMGNPHAV IFVDDVEKAP
LTTLGPVLET HEMFPERVNV EFIEILNDDE MNFRVWERGS GVTQACGTGA CAAVVAAILN
GKMERGKEIT VHLAGGDLMI AWTEEGNVLM KGPAEVICRG VYEYKIEA
|
|---|
| |