Gene BCB4264_A4287 details

Gene Information

• Locus tag: BCB4264_A4287
• Symbol: dxs
• ID: 7100177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus B4264
• Kingdom: Bacteria
• Replicon accession: NC_011725
• Strand: -
• Start bp: 4180574
• End bp: 4182466
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643471800
• Product: 1-deoxy-D-xylulose-5-phosphate synthase
• Protein accession: YP_002368980
• Protein GI: 218234812
• COG category: [H] Coenzyme transport and metabolism; [I] Lipid transport and metabolism
• COG ID: [COG1154] Deoxyxylulose-5-phosphate synthase
• TIGRFAM ID: [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000332787
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATCTAA CGCAAATTCA AAACCCTAGT TTTTTGAAAG ATATGTCTAT CAGTGAACTA 
GAGGGATTGA GTGAGGATAT TCGTAAGTTT TTAATTGAAG AGCTCTCTCA AACAGGTGGA 
CATATTGCAC CTAATTTAGG TGTAGTAGAA CTCACAATTG CTCTGCACAA ATTATTTGAT 
AGCCCGCAAG ATAAATTTTT ATGGGATGTA GGACATCAAT CCTATGTACA TAAAATTTTA 
ACTGGACGCG CGAAAGAGTT TGGTACATTA AGGCAATATC AAGGTCTATG TGGTTTCCCG 
AAACGTTGTG AGAGTGAGCA CGATGTATGG GAAACTGGTC ATAGCTCGAC TTCGTTATCG 
GCTGCAATGG GAATGGCTCT GGCACGTGAT TTAAAGAAAA CGAAAGAATA TGTTATACCA 
ATTATTGGAG ATGGTGCTTT AACAGGCGGA ATGGCTTTAG AAGCATTGAA CCATATTGGA 
CATGAAAAAA CAGACATGAT TGTTATTTTG AATGATAATG AAATGTCAAT TGCACCAAAC 
GTTGGTGCGC TTCATAATGT GCTCGGTCGT TTACGTACTG CAGGAAAATA TCACTGGGTA 
AAAGATGAAT TAGAGTATAT ATTAAAGAAA ATCCCAGCAG TTGGCGGGAA AGTGGCTGCG 
ACAGCAGAGA AAATAAAAGA TAGTCTTAAA TATTTACTAG TATCCGGTGT ATTTTTCGAA 
GAGTTAGGCT TTACATATTT AGGTCCAGTC GATGGACATG ATTATGAAAA GTTATTCGAA 
ACGTTGCAAT ATGCAAAGAA AACAAAAGGC CCAGTACTCG TTCACGTTAT TACGAAAAAA 
GGAAAAGGTT ATAAACCGGC TGAGAGTGAC GTTATTGGAA CTTGGCATGG AACAGGACCT 
TATAAAATTG AATCAGGTGA CTTCGTTAAG CCGAAAGAAG TTGCACCAGC ATGGAGTGCT 
GTCGTTAGTG AAACAGTACT TAAGCTAGCG AGAGCAGATG AGCGTATCGT AGCAATTACA 
CCTGCAATGC CTGTTGGATC AAAACTTGAG AAATTCCAAA AAGAATTCCC AGATCGTATG 
ATTGATGTAG GTATTGCAGA ACAGCATGCT ACAACAATGG CAGCAGGTAT GGCAACGCAA 
GGAATGAAGC CATTCTTAGC GATTTATTCA ACATTTTTAC AAAGAGCATA TGACCAAGTT 
GTTCATGATA TATGCCGCCA AAATTTAAAT GTTTTCATCG GAATAGATCG TTCGGGATTA 
GTAGGAGCAG ATGGTGAAAC GCATCAAGGC GTATTTGATA TCTCATTCTT ACGTCACTTG 
CCGAATATGG TGCTTATGAT GCCGAAAGAT GAAAATGAAG GGCAACATTT AGTTTATACG 
GCGATGCAAT ATGAAGATGG ACCAATCGCA TTGCGTTATG CGCGCGGTAA TGGACTTGGC 
GTTCATATGG ATGAAGAATT AAAGGCGATT CCAATCGGTA CGTGGGAGAC GTTAAAAGAG 
GGTACACAAG CAGCTATTTT AACGTTTGGT ACGACAATAC CAATGGCAAT GGAAGCAGCT 
GAGCGTCTTG AAAAAGCTGG GGTTTCAGTG AAAGTAGTGA ATGCTCGCTT TATTAAACCA 
ATGGATGAAG CATATTTACA TGATCTTCTA GGAAAGAATA TACCGATTTT AACGATTGAA 
GAAGCTTGTT TAATCGGTGG TTTTGGAACA GGAGTAGTTG AATTTGCATC TGAAAATGGT 
TACCATAGTG CATTAGTTGA ACGAATGGGT ATTCCAGATC GCTTCATAGA GCACGGGAGT 
GTAACAAAAT TATTAGAAGA AATTGGTTTA ACGACAGATG CTGTTGTAGA CCGTATTCAT 
ACAATGATTC CATCAAAACA AAAAAGGGCG TAA 

 

Protein sequence

MDLTQIQNPS FLKDMSISEL EGLSEDIRKF LIEELSQTGG HIAPNLGVVE LTIALHKLFD 
SPQDKFLWDV GHQSYVHKIL TGRAKEFGTL RQYQGLCGFP KRCESEHDVW ETGHSSTSLS 
AAMGMALARD LKKTKEYVIP IIGDGALTGG MALEALNHIG HEKTDMIVIL NDNEMSIAPN 
VGALHNVLGR LRTAGKYHWV KDELEYILKK IPAVGGKVAA TAEKIKDSLK YLLVSGVFFE 
ELGFTYLGPV DGHDYEKLFE TLQYAKKTKG PVLVHVITKK GKGYKPAESD VIGTWHGTGP 
YKIESGDFVK PKEVAPAWSA VVSETVLKLA RADERIVAIT PAMPVGSKLE KFQKEFPDRM 
IDVGIAEQHA TTMAAGMATQ GMKPFLAIYS TFLQRAYDQV VHDICRQNLN VFIGIDRSGL 
VGADGETHQG VFDISFLRHL PNMVLMMPKD ENEGQHLVYT AMQYEDGPIA LRYARGNGLG 
VHMDEELKAI PIGTWETLKE GTQAAILTFG TTIPMAMEAA ERLEKAGVSV KVVNARFIKP 
MDEAYLHDLL GKNIPILTIE EACLIGGFGT GVVEFASENG YHSALVERMG IPDRFIEHGS 
VTKLLEEIGL TTDAVVDRIH TMIPSKQKRA