| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A3397 |
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| Symbol | ribD1 |
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| ID | 7099901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus B4264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011725 |
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| Strand | - |
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| Start bp | 3277184 |
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| End bp | 3278287 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643470921 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002368101 |
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| Protein GI | 218232159 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGC ATGAATTGTA TATGAAGCTA GCACTAGAAA ATGCCAAGGC TATGAAGGGA
CAAACGACTC CAAATCCATT GGTTGGATCT GTAATTGTAA ATGATAATCG AATTGTAGGG
GTCGGAGCAC ATATGAAGGC CGGAGAATCA CATGCCGAAA TACATGCGAT ACGTATGGCT
GGAGAACAGG CACGTGGTGG TACAATTTAT GTAACTCTTG AACCTTGTTC TCATCATGGT
AGAACAGGGC CTTGTGCTGA AGCAATTGTA CAAGCAGGAA TTAAGAAGGT AGTAGTTGCT
ACACTTGATC CAAACCCGCT TGTTTCTGGA CGTGGAATTA AAATTCTACA AGATGCAGGT
ATTGAAGTAC TTGTAGGAGT GTGTGAAGAA GAATCTAAAA AAATGAATGA AGTCTTTAAT
AAATATATTT TGACAAAGCG CCCATTTGTA ACGATTAAAT CAGGAGTTAC ATTAGATGGG
AAAATCGCTA CGTCTTTATC GGATAGTAAG TGGATTACAT CTACAGAAGC AAGACAAGAA
GTACACCAAA TACGAAACGA AAATGCGGCT ATTTTAGTAG GAGCGAATAC TGTTCAAAAG
GATAATCCAT CATTGACAAC GCGTATTCCA AATGGCCGAA ATCCAATTCG AGTAATATTG
GACTCGACAT TACGCATACC GATGGAAGCT AACGTTGTTA CAGATAGAGA AGCTCCTACC
TGGATATTTA CAACAAGTAA TCATGCAGAG GAAAAAAAGA AAGCATTAGA AAATGCAGGA
GTTAAAGTAT TTGTTACTAG CGGAGAAAAG CATATAAACT TACATGAAAT GCTTGATGTT
TTAGGACAAA AAGGAGTTTC CTCCCTGCTT ATTGAAGGTG GTGGAGAAGT AAATGCTTCG
TTTATTGAAA ATAAACTAAT GGATAAAATT ATTTTATATT TCGCACCTAA AATTATTGGA
GGTAGATTGG CGCCTAGTTT TGTAGAGGGG ACTGGTATTA CTAAAATGAA AGATGCAATT
GAATTTAAGG ATATATCATT TACCCAGATT GGAAAAGATT ATAGATTTAT TGGCTATCCA
GCATATCGGA AAGATGAGAA ATAA
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| Protein sequence | MLEHELYMKL ALENAKAMKG QTTPNPLVGS VIVNDNRIVG VGAHMKAGES HAEIHAIRMA
GEQARGGTIY VTLEPCSHHG RTGPCAEAIV QAGIKKVVVA TLDPNPLVSG RGIKILQDAG
IEVLVGVCEE ESKKMNEVFN KYILTKRPFV TIKSGVTLDG KIATSLSDSK WITSTEARQE
VHQIRNENAA ILVGANTVQK DNPSLTTRIP NGRNPIRVIL DSTLRIPMEA NVVTDREAPT
WIFTTSNHAE EKKKALENAG VKVFVTSGEK HINLHEMLDV LGQKGVSSLL IEGGGEVNAS
FIENKLMDKI ILYFAPKIIG GRLAPSFVEG TGITKMKDAI EFKDISFTQI GKDYRFIGYP
AYRKDEK
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