| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCB4264_A1296 |
|---|
| Symbol | trpB |
|---|
| ID | 7096803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus B4264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011725 |
|---|
| Strand | + |
|---|
| Start bp | 1256707 |
|---|
| End bp | 1257900 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643468845 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_002366028 |
|---|
| Protein GI | 218234944 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG CATATCCAGA TGAAAAAGGA CATTACGGTA TATACGGAGG ACGATACGTT
CCAGAAACGT TAATGCAATC TGTACTAGAA CTAGAAGAAG CATATAAAGA AGCGATGCAA
GATGAAGCAT TTCAAAAGGA ATTAAATCAT TATTTAAAAA CGTACGTCGG AAGAGAAACA
CCGCTTTATT TCGCTGAAAA TCTGACGAAG TATTGCGGAG GTGCAAAGAT TTATTTAAAA
CGTGAAGATT TGAACCATAC AGGAGCTCAT AAAATTAACA ATACAATCGG TCAGGCACTA
CTTGCAGTGC GAATGGGCAA GAAAAAAGTT GTCGCTGAAA CAGGAGCTGG ACAACACGGA
GTTGCAACAG CTACTGTATG TGCTCTTCTC GGATTAGAAT GCGTCATTTT TATGGGAGAA
GAAGATGTAA GACGTCAAAA ATTAAATGTG TTCCGAATGG AATTACTCGG AGCGAAAGTA
GAAAGTGTAG CGGCAGGTAG TGGTACATTA AAAGATGCGG TAAACGAGGC GCTTCGTTAC
TGGGTTTCAC ATGTGCATGA TACGCACTAC ATTATGGGAT CTGTTCTCGG ACCACATCCA
TTCCCGCAAA TTGTACGTGA TTTCCAAAGT GTAATTGGAA ATGAAACGAA AAAACAATAT
GAGGCGTTAG AAGGAAAGTT ACCAGAAGCA GTCGTTGCTT GTATTGGCGG TGGCAGTAAT
GCGATGGGAA TGTTTTATCC ATTTGTACAT GATGAAGAAG TTGCTCTTTA CGGCGTAGAA
GCAGCTGGAA AAGGCGTTCA TACAGAAAAG CATGCAGCAA CTTTAACGAA AGGAAGCGTT
GGCGTTCTCC ACGGATCAAT GATGTATCTT CTGCAAAACG AAGAAGGACA AATTCAAGAA
GCACACTCTA TTTCAGCAGG ACTTGATTAT CCAGGTGTTG GTCCAGAACA TAGCTTGCTA
AAAGATATTG GCCGCGTTTC TTATCATTCG ATAACAGACG AAGAAGCATT AGAAGCATTT
CAATTATTAA CGAAAAAAGA AGGCATTATC CCGGCGTTAG AAAGCTCGCA TGCTGTCGCA
TACGCATTAA AATTAGCGCC GCAAATGAAG AAAGATGAAG GGCTTGTCAT TTGTTTATCT
GGCCGCGGTG ATAAAGATGT AGAGAGTATA AAACGTTATA TGGAAGAGGT GTAA
|
|---|
| Protein sequence | MNYAYPDEKG HYGIYGGRYV PETLMQSVLE LEEAYKEAMQ DEAFQKELNH YLKTYVGRET
PLYFAENLTK YCGGAKIYLK REDLNHTGAH KINNTIGQAL LAVRMGKKKV VAETGAGQHG
VATATVCALL GLECVIFMGE EDVRRQKLNV FRMELLGAKV ESVAAGSGTL KDAVNEALRY
WVSHVHDTHY IMGSVLGPHP FPQIVRDFQS VIGNETKKQY EALEGKLPEA VVACIGGGSN
AMGMFYPFVH DEEVALYGVE AAGKGVHTEK HAATLTKGSV GVLHGSMMYL LQNEEGQIQE
AHSISAGLDY PGVGPEHSLL KDIGRVSYHS ITDEEALEAF QLLTKKEGII PALESSHAVA
YALKLAPQMK KDEGLVICLS GRGDKDVESI KRYMEEV
|
|---|
| |