Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCB4264_A0590 |
Symbol | opuD1 |
ID | 7100454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus B4264 |
Kingdom | Bacteria |
Replicon accession | NC_011725 |
Strand | - |
Start bp | 565567 |
End bp | 567117 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643468145 |
Product | glycine betaine transporter |
Protein accession | YP_002365350 |
Protein GI | 218230912 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000851893 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAAAA AAGAAAACAG TGTATTTTAT ATCTCCTTCT TGCTAACAAC ATTATTCATT ATATGGGGAA TTACCCCAGC AAGTTGGATA CAAGGCTACG ATTTACAAAG TGTTACATCT TCTTTAAACT CATTTATCCT CAATAAATTT GGATGGTTTT ACTCTCTACT TATGACTACA ATGATTATTT TGGCTGCTTA TTTAGCATTT TCCAAGTACG GTTCTATTCG TCTTGGTAAA GATGGAGAAA AGCCAAAATA TAATTATCCA TCTTGGCTAT CCATGTTGTT TGGGGCAGGA ATGGGAATTG GACTCCTCTT TTATGGAATC GCTGAACCGA TTTCACATTT TACAGATCCG TTAACAGGAA AAGCAGGTAC AGAAGAAAGC GCCAAACTCG CTATGCAATA TTCATTTTTC CACTGGGGAC TCTTTCCGTG GTCACTATAC GCAATGGTCG CTTTAACAAT TGCATATTTC ACATTCCGCA AACAAAAAGG TAGCACTATC GGGGCTACAG TTACTCCATT ATTTAATCGA TCGAAAAATT CTCGTATTGG AAAAACAGTT GATATTCTAG CTGTTTTAGC CACAGTATTT GGCATTGTAC CATCTGTTGG GATTGGTGCT CAACAAATTG CTGGAGGATT AAGCTATTTA TTCCCTTCCA TTCATAACAC TTTACTTACT CAGCTCGTAC TTATAGCTAT ATTCGCTGTT TTATATTTAA CAAGTGCACA AACTGGCTTA GATCGTGGGA TTAAATATTT GAGCAACTTG AATTTCTCTC TTGCAGGCAT TTTACTCATC TCTTTCTTAC TTTTAGGACC AACTGTATTT ATTATGAAAT ATTTCACATC TACACTCGGT TCTTATATCG GCGCTTTACC TAGTATGGGA TTAAATTTAG GAGCATTTAG TGAAAAATCT TCTTCTTGGA TTGAAAACTG GACTATTTTC TATTGGGGGT GGTGGATCTC TTGGTCTCCA TTCGTCGGCA CATTTATCGC ACGTATTTCT AAAGGACGCA CAATAAAAGA ATTTATTTTT GGAGTTGTAT TAGTCCCAAC TCTTATCTGT ACATTTTGGT TTGCAGTATT TGGTGGTACC GCAATTCATA TGGAAATGTT CCAATCGCTT GGAATAGCTG ATGAAATTGC AAAAAATGGT ACAGAGATTG GATTATTTGC TGTTATTTCA CATCTACCAT TCTCTACATT TTTAACGATT ATCGGGTTAA TTTTAGTAGC CACATTTTTC GTTACTTCTG CCGATTCAGC AACATTTGTT GTTTCAATGC AAACGAGTAA CGGAAGCTTA TCACCGAAAA ATAGTTTAAA ACTTATATGG GGATTAACAA TCGCGATAAT TGCCGCTATT TTATTACAAG CTGGAGGATT AAATGCACTA CAAATCGCAG CTATAATTGC TGCGCTACCA TTTTCTATTG TAGTCGTTCT TATGGTCACT TCTCTTTTTA AAGAGCTAAA AAAAGAAGAT GTTAATTCGC AAACGAAAGA AATCCCGAAA AAAATAAAAA AGGTTATGTA A
|
Protein sequence | MIKKENSVFY ISFLLTTLFI IWGITPASWI QGYDLQSVTS SLNSFILNKF GWFYSLLMTT MIILAAYLAF SKYGSIRLGK DGEKPKYNYP SWLSMLFGAG MGIGLLFYGI AEPISHFTDP LTGKAGTEES AKLAMQYSFF HWGLFPWSLY AMVALTIAYF TFRKQKGSTI GATVTPLFNR SKNSRIGKTV DILAVLATVF GIVPSVGIGA QQIAGGLSYL FPSIHNTLLT QLVLIAIFAV LYLTSAQTGL DRGIKYLSNL NFSLAGILLI SFLLLGPTVF IMKYFTSTLG SYIGALPSMG LNLGAFSEKS SSWIENWTIF YWGWWISWSP FVGTFIARIS KGRTIKEFIF GVVLVPTLIC TFWFAVFGGT AIHMEMFQSL GIADEIAKNG TEIGLFAVIS HLPFSTFLTI IGLILVATFF VTSADSATFV VSMQTSNGSL SPKNSLKLIW GLTIAIIAAI LLQAGGLNAL QIAAIIAALP FSIVVVLMVT SLFKELKKED VNSQTKEIPK KIKKVM
|
| |