Gene BCB4264_A0352 details

Gene Information

• Locus tag: BCB4264_A0352
• Symbol: ligA
• ID: 7100496
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus B4264
• Kingdom: Bacteria
• Replicon accession: NC_011725
• Strand: +
• Start bp: 327048
• End bp: 329057
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643467911
• Product: NAD-dependent DNA ligase LigA
• Protein accession: YP_002365135
• Protein GI: 218230787
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II)
• TIGRFAM ID: [TIGR00575] DNA ligase, NAD-dependent

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAG AGATAGCAAA AAAACGTATT GAAGAACTGC GTGATTTATT AAATACATTT 
AACTATCAAT ATCACGTATT AGACAATCCT TCTGTTTCTG ATGCGGAATA TGACCGTAAT 
ATGCAGGAGC TTATAAAATT AGAAGCAGAG AACCCAGAGT TTATGAGTGA AGATTCTCCC 
TCCGTTCGCG TTGGGGGGAC TGTTCTTGAT ATATTTGAAA AAGTAACACA TAAGTCACCA 
ATGTTAAGTT TAGGAAATGC ATTTAACGAA GGAGATTTAC GTGATTTCGA CAGAAGAGTA 
CGTCAAGGAA TTGATGGTGC GAATGTAAGA TATATATGTG AATTAAAAAT TGACGGGCTT 
GCCGTTTCGC TTCATTATGA AAAAGGACGC TTCATTCAAG GGGCGACACG TGGTGATGGT 
GTAACGGGTG AAGATATTAC TCAAAATTTA AAAACGATTA AAGCTATCCC ACTTCGTTTA 
AATGAAGAAG TAACGTTAGA AGCACGAGGC GAAGCTTATA TGCCGAAGCG TTCATTCGTT 
AAACTAAATG AAGAAAAAGA GCAAAATGGA GAAGATGTAT TTGCGAATCC GCGTAATGCA 
GCAGCAGGTT CAATACGTCA ACTTGATCCG AAAATTGCAG CGAAGCGTAA CTTATCTATG 
TTTGTGTATG GTCTTGCGAA TGTAGAAGAA AAAACAATTC CATCACATAG TGAATCGCTT 
GATTTCTTAG GTGAACTTGG ATTTAAGACA AATCCAAATC GCCGTACATG TGAAACAATT 
GAAGAAGTTA TAGCTTATGT AGAAGAATGG CAAGAAAAAC GTCCGCATCT TGATTATGAG 
ATTGATGGAA TCGTTATAAA AGTAGATGAT GTTGCCCTTC AAGAAAGTCT AGGAACTACA 
GCGAAGAGTC CAAGATGGGC GATTGCTTAT AAATTCCCGG CTGAAGAAGT TGTAACGAGA 
TTAACAGGCA TTGAATTAAG TGTTGGCCGA ACAGGAGTTG TAACACCGAC TGCAGAACTA 
GAGCCAGTGA GAGTTGCTGG TACGATTGTT CGTCGTGCTT CTTTACATAA CGAAGATTTA 
ATTCGTGAAA AAGACATTCG AATTGGTGAC TACGTTGTTG TGAAGAAGGC TGGAGATATT 
ATTCCTGAAG TTGTGAACGT TATTTTTGAT AAGCGTACTG GTGAGGAAGA AGAATACCGC 
ATGCCAACTC ATTGTCCAGC ATGTGAGAGT GAACTTGTTC GTTTAGAAGA AGAAGTAGCA 
CTTCGTTGTA TAAATCCAAC TTGTCCTGCT CAAATTCGAG AAGGGTTAAT CCATTTCGTT 
TCAAGAAATG CAATGAATAT TGATGGACTT GGGGAACGTG TCATTACACA ACTCTTTGAT 
GCTGATTACA TTCGTACATT TGCTGATTTA TATGCATTGA CGAAAGAGCA ATTATTACAG 
TTAGAACGTT TTGGTGAAAA ATCAGCAACA AACTTAATAC AAGCAATTGA AAATTCTAAA 
GAAAACTCGT TAGAGCGATT ATTATTTGGT CTTGGAATTC GCCACGTTGG AGCGAAAGCA 
GCACGTACAT TTGCAGAGCA CTTTGAAACG ATGGATGAGC TTGTAAAAGC AACGGAAGAA 
GAACTAAAAG CAATTAATGA AATTGGCGAA AAAATGGCTC AATCTGTTGT GACATATTTT 
GATAATGAAG ATGTATTAGA GTTATTACAG CAGTTTAAAG AGTATGGCGT GAATATGAAA 
TACAAAGGTA TAAAAATTGC AGATTTACAA AATGTTGAAT CTTACTTCGC AGGAAAAACG 
GTTGTTTTAA CAGGTAAGTT AGAAGTTATG GGACGAAGTG AAGCGAAGAA GAAGATTGAG 
GCATTAGGTG GAAAAGTAAC GGGAAGTGTT AGTAAGAGTA CGGATTTAGT TGTTGCAGGT 
GAAGCGGCTG GTTCGAAATT AGCACAAGCG GAGAAACATA ATGTTGAGGT TTGGAATGAA 
GAGAGGTTCT TACAAGAGCT AAATAAGTAA 

 

Protein sequence

MSKEIAKKRI EELRDLLNTF NYQYHVLDNP SVSDAEYDRN MQELIKLEAE NPEFMSEDSP 
SVRVGGTVLD IFEKVTHKSP MLSLGNAFNE GDLRDFDRRV RQGIDGANVR YICELKIDGL 
AVSLHYEKGR FIQGATRGDG VTGEDITQNL KTIKAIPLRL NEEVTLEARG EAYMPKRSFV 
KLNEEKEQNG EDVFANPRNA AAGSIRQLDP KIAAKRNLSM FVYGLANVEE KTIPSHSESL 
DFLGELGFKT NPNRRTCETI EEVIAYVEEW QEKRPHLDYE IDGIVIKVDD VALQESLGTT 
AKSPRWAIAY KFPAEEVVTR LTGIELSVGR TGVVTPTAEL EPVRVAGTIV RRASLHNEDL 
IREKDIRIGD YVVVKKAGDI IPEVVNVIFD KRTGEEEEYR MPTHCPACES ELVRLEEEVA 
LRCINPTCPA QIREGLIHFV SRNAMNIDGL GERVITQLFD ADYIRTFADL YALTKEQLLQ 
LERFGEKSAT NLIQAIENSK ENSLERLLFG LGIRHVGAKA ARTFAEHFET MDELVKATEE 
ELKAINEIGE KMAQSVVTYF DNEDVLELLQ QFKEYGVNMK YKGIKIADLQ NVESYFAGKT 
VVLTGKLEVM GRSEAKKKIE ALGGKVTGSV SKSTDLVVAG EAAGSKLAQA EKHNVEVWNE 
ERFLQELNK