Gene PCC8801_4520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_4520 
Symbol 
ID7095901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011723 
Strand
Start bp12597 
End bp13418 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content48% 
IMG OID643467502 
Productpentapeptide repeat protein 
Protein accessionYP_002364798 
Protein GI218203945 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones84 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TTGCTGCTTA CACTAACCCT ATTCCCCTCT CTCTTAATGA GATTAAAGAA 
GCTCTGACTC ATGGCCAAAG TTTGGCTAAT ATGAATTTAC AAGGGATAGA TCTAAGCCAG
ATGGATCTAT CCTTTGCCAA TTTAAGCAGT GCTATTTTAA TTGGGATTAA CGGTCAGGGA
ACCAACTTTC AGGGAGCTGA TTTACGCGGT GCTGACTTAC GCGGCGCTGA CTTAAAGTCT
GCCAACCTAA CCAATGTTGA TTTGCAAGGC AGTTATTTAC ACCGCGCCCA GTTACAAGGG
TGTCTTTTGA GTGCTGCCAA GCTAGAGTCG GCTAAACTAC AATTGGCACT CTACGACTCT
CTCACTGTTT GGCCTGAAGG CTATGACTAT CGGAATTCCG GCGCAGTGGG TCCCTATGCT
AACCTAGGGG GAGTTTTTCT GAATACAGCC AATCTCAGGG GTGCTGATCT GCGTTATGCC
AACTTGAGAG GGGCTTACTT AAGTGGGGCT GATTTGACGG GGGCTAATTT GGAAGGAGCC
GCCTTGAGTG GGGCTACCCT TCAAGGAGCT TTTCTCACAG GGGCTTACTT GCGCGGAGCT
CGACTCATTG GTACAGAGTT ACAAGGAGCT GACTTGCGTG GAGCCGACTT AACCGAAGTT
AGTTGGGAAC AGTTACAGAG TATCGCTGGA GCCGATTTTA CGAGGGCTCA AGGTTTAAGT
GAGTCGGATC TGGTTTGTTT ATGCAGTCGT CCCTCTCAAG AATTGGGGAC TTGGAATTCC
TTTACTCGCT CTAATACGGC GACAAGCCTT GGGTGCTCTT AA
 
Protein sequence
MKTLAAYTNP IPLSLNEIKE ALTHGQSLAN MNLQGIDLSQ MDLSFANLSS AILIGINGQG 
TNFQGADLRG ADLRGADLKS ANLTNVDLQG SYLHRAQLQG CLLSAAKLES AKLQLALYDS
LTVWPEGYDY RNSGAVGPYA NLGGVFLNTA NLRGADLRYA NLRGAYLSGA DLTGANLEGA
ALSGATLQGA FLTGAYLRGA RLIGTELQGA DLRGADLTEV SWEQLQSIAG ADFTRAQGLS
ESDLVCLCSR PSQELGTWNS FTRSNTATSL GCS