| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55230 |
|---|
| Symbol | |
|---|
| ID | 7199468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011701 |
|---|
| Strand | - |
|---|
| Start bp | 41652 |
|---|
| End bp | 44388 |
|---|
| Gene Length | 2737 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185608 |
|---|
| Protein GI | 219130936 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTTTCCCCTG GCACGACCAT TGCATTCCTC TCGCCTTTTT TGCTTGTCCG TTCCGCTCCT
TGTTGATTCT ACCACCATGG TACGTACAAA CTGTCGCGTG TGTGTGTATG TGGGTGTGTT
TGGGTGTTTG GGTGTGTAGG AATGATGCCT GTGTGCGTAT GTATAGGTTG AGAAAGAGGC
AAGCATGGTT GGTTTGGTCG AGAAAGGCAT CAGCCAGATC TGTCTTGGTA GGATAAATCG
ATCGATTCAA TTGATTGATC GATTCACTAC CAACACCAGG GCAAAACGTT GCGAAAAGAC
GGCTCTGGGG TGCGAATCAG TCTCCCTCGT TGTACCCGTC GACCGACATT CCGCTTCCGA
ATCCAATACT GTGGCTCACC AGATATGTAT TTGTGTATGT GTGTGTTTCT CGTTTTTTCT
TACAGAGTGC CGCCGATACC GAAAGCTACG CCTTTTCCGC GGATATCAAC CAGCTCCTTT
CGTTGAGTAA GTGCGCTTGG TCTATCACCA CGGGTCGAGC CTCTCACCGG GCGTCTTTGT
CTCACACACA CATTTATTTG TATCTGCCCC TTTGACACAG TCATCAACAC GTTCTATTCC
AACAAGGAAA TCTTTCTCCG CGAATTGATC TCCAACGCGT CCGATGCCCT CGACAAGATC
CGCTACCAGT CCCTCACGGA CTCCTCCGTC CTGGACACGG AGCCCGAACT ACAGATCAAG
CTCACTGCCG ACAAGGCCAA CAACACCTTG ACGATTGAGG ACTCGGGCAT TGGCATGACC
AAGGTTGATC TCGTCAACAA CCTCGGAACC ATTGCCAAGT CCGGAACCAA GGCCTTCATG
GAAGCCCTCT CCGCCGGAGC CGACATTTCC ATGATTGGAC AGTTCGGAGT GGGCTTCTAC
TCGGCCTACC TCGTCGCCGA TAAGGTCGAA GTCACCTCCA AGCACAACGA CGACGACGCG
CACGTCTGGA GTTCCGAAGC CGGCGGCTCC TTCACCGTCG TCAAGGCCGA AGACCCGGGT
TTCAACCGTG GTACCCGCAT CGTCTTGCAC CTCAAGGAAG ACATGTCCGA GTACCTCGAA
GAAAAACGCG TCAAGGAACT CGTCAAGAAG CATTCCGAGT TTATCGGATT CCCCATCAAA
CTGTACACCG AAAAGACCAC CGAAAAGGAA GTCACCGATG ATGAAGACGA TGACGAGGAA
GACGCCGACG ATGATGACAA ACCCAAGGTG GAAGAAGTCG ACGACGAAGA AGACGCCAAG
AAGGAAAAGA AAACCAAAAA AATCAAAGAA GTCAGCCACG AATGGGAACA CCTCAACAAC
ACCAAACCCA TCTGGATGCG CAAACCCGAC GATGTCTCCC AAGACGAGTA CGTGGCCTTT
TACAAGTCCG TTTCTAACGA TTGGGAAGAA CACGCTGCCG TCAAGCACTT TTCCGTCGAA
GGTCAACTCG AATTCCGTGC CATCTTGTTT ACTCCCAAGC GTGCTCCCTT TGACATGTTC
GACGGCGGTA GCAAGAAAAA GCACAACCAC ATCAAGCTCT ACGTCCGTCG AGTCTTTATC
ATGGACAACT GCGAAGATAT CTTGCCTGAA TGGTTGCAGT TTGTCCGGGG TATCGTTGAC
TCGGAGGATC TTCCCCTTAA CATTTCGCGC GAAACGCTCC AGCAGAATAA GATTCTACGT
GTCATCAAGA AGAACCTGGT CAAGAAGTGT ATCGAGATGT TCAACGATTT GACCGAAAAC
GAGGACGCCT ACAAAAAGTT TTACGAAGCC TTTAGCAAAA ACCTCAAGCT CGGCATTCAC
GAAGACTCGA CCAACCGCGC CAAGATTGCC AAGCTCTTGC GTTACCATTC CACCAAGTCG
GGCGAAGAAA TGACCTCACT CGACGACTAT GTGGGCCGTA TGGACGACAA ACAACCCGGA
ATCTACTACG TGACGGGCGA ATCCAAGCGC GCCGTCGAAA CCTCGCCGTT TTTGGAGCGC
CTCAAGAAGA AGGGATACGA AGTCCTTTTC ATGGTGGACC CCATTGACGA GTATGCAGTT
CAACAACTCA AGGAGTTTGA AGGCAAGAAG CTCATCAGTG CCACCAAGGA AGGTCTCGAA
ATCGAGGAAG ACGAGGACGA GAAGAAGGCC TTTGAGGAAG CCAAAACCAA GGCAGAATCC
CTCTGCAAAC TCATGAAGGA AGTCCTCGAC GACAAGGTCG AAAAGGTGGT CGTGTCTTCC
CGCTTGGCCG ATTCTCCTTG CGTTCTCGTT ACCGGCGAGT ACGGCTGGAC CGCCAATATG
GAACGTATCA TGAAGGCTCA GGCCCTTCGT GACGCCACCC AGTCGTCCTA CATGTCTTCC
AAAAAGACCA TGGAAATCAA CCCCCAGAAC TCGATTATTG TAGCTCTTCG TGAAAAGGCT
GAGGCCGACC AGAGCGACAA GACCGTTAAG GATCTTATTT GGCTCTTGTA CGATACGTCA
CTCCTTACGA GTGGATTCTC TCTCGATGAG CCTGCGACCT TTGCGTCCCG CATTCATCGC
CTCGTCAAGT TGGGTCTCTC CATTGACGAT GATGGTGCCG ATGGCGACGA TGACGAGATG
GACGACTTGC CGCCTTTGGA CGGGGATGAC GAAAACGAGG AGTCTGCCAT GGAACAGGTC
GACTAAACCT GGTGGCCCGG TTTTACGTTA CGCAACTAGA CAAGAGACTT TTTCACCACC
ACCGTAGGGA AATAAAATAA GCAATTGTAG AGAACGA
|
|---|
| Protein sequence | MSAADTESYA FSADINQLLS LIINTFYSNK EIFLRELISN ASDALDKIRY QSLTDSSVLD
TEPELQIKLT ADKANNTLTI EDSGIGMTKV DLVNNLGTIA KSGTKAFMEA LSAGADISMI
GQFGVGFYSA YLVADKVEVT SKHNDDDAHV WSSEAGGSFT VVKAEDPGFN RGTRIVLHLK
EDMSEYLEEK RVKELVKKHS EFIGFPIKLY TEKTTEKEVT DDEDDDEEDA DDDDKPKVEE
VDDEEDAKKE KKTKKIKEVS HEWEHLNNTK PIWMRKPDDV SQDEYVAFYK SVSNDWEEHA
AVKHFSVEGQ LEFRAILFTP KRAPFDMFDG GSKKKHNHIK LYVRRVFIMD NCEDILPEWL
QFVRGIVDSE DLPLNISRET LQQNKILRVI KKNLVKKCIE MFNDLTENED AYKKFYEAFS
KNLKLGIHED STNRAKIAKL LRYHSTKSGE EMTSLDDYVG RMDDKQPGIY YVTGESKRAV
ETSPFLERLK KKGYEVLFMV DPIDEYAVQQ LKEFEGKKLI SATKEGLEIE EDEDEKKAFE
EAKTKAESLC KLMKEVLDDK VEKVVVSSRL ADSPCVLVTG EYGWTANMER IMKAQALRDA
TQSSYMSSKK TMEINPQNSI IVALREKAEA DQSDKTVKDL IWLLYDTSLL TSGFSLDEPA
TFASRIHRLV KLGLSIDDDG ADGDDDEMDD LPPLDGDDEN EESAMEQVD
|
|---|
| |