| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50641 |
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| Symbol | |
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| ID | 7199478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011701 |
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| Strand | + |
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| Start bp | 60897 |
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| End bp | 62379 |
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| Gene Length | 1483 bp |
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| Protein Length | 463 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185603 |
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| Protein GI | 219130926 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00738361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTTGCTCCC CAAACTGACC ATGGGGGTCG GTACCAAAGG CAAGACATCC ATCGCTTACA
CCTTCGCCTT CGGAAATTCA CTTTTTTTCC AATGAAGATT ATTCGGAAAA CCCTGCAGCT
CACGATCTGG CTATCCGCGT GTCTCGTCAC CTCCTATTCC TACAGCAATA GCAACGTGCC
GGTAGGCAAA TCCAGTGCCA GGAACACTGA GACTTCCCCC GTCCCTATAT CTTCGCATAC
CTTTTTGTTC CGATCCCACC CCATTGCATA TGAGACCGCT GTGGTCAGAT TTCCCACCAA
GATAGCCGTG CCGCCGCAAT CACCAACCAC ACCGTATCGA GACGTCTCGC CGGTGCTGCT
CCTGAACGGC TTTGGGGTCG GGTCCTTCCA CCAACACCGA CTCATCCAAG CCCTGCAACA
ACAGTCCGAC CAATCTACAG TAACTGACAA AAACAGCAAT AGAGATGAAC CCGCCAGTCT
TGCTACTATT ATTTACACGC TTGATTATCT CGGACAAGGT CGCTCCTGGC CCGTGGATTC
CAACGATGGA CAAAGTGAAG CGGAATTGGG ATTGCGCTAC TGTGGACAAA CATGGGTGGA
CCAGATTGTA GCATTTTTGG AGACAATCGT TTTGCCTGCT CGTGAATCCT GTTTCTCGTC
CACGAGACAC TATACTGCTC CTCCGGAACG AGTCCATTTG GTAGGCAATT CTGTCGGCGG
ACACTTGGCC GTATTTGTGG CTGCCTTGCG ACCCGACTTG GTAGCCTCCG TCACCCTGCT
CAACGCCACT CCTGTTTGGG GACTCAATTT GCCCGGCTGG ACCGGTCATT TGCCGGCTCC
TTTTCTGCCC AAGACCATTG GTCGATTTCT GTTCGATCAG ATTCGCAATC TCAACACAAT
CGAACAATAT TTGGCGGCGG CGTACGTCCA TCGGGAGGCG TTTGACGCCA CGCTCATGCA
ACAAATCCGA GCCTGCACTG AAAGTCAAGG GGGACACGCG GCCTTTGCCT CGATTCTTTG
GTCTCCTCCC GTGACCTTAC CGACGAAACC AAATGATGCT CCAAGCAATA CCAAAAACGA
CTACAAAAAG ATCAACGCTT TCGACGAAGC CCTTTCCCGG CTCGAGTGTG ACGTTTTGCT
ATGCTTTGGA GCCGACGATC CTTGGTGCAA ACCGGCCTTT GCAGCGCGTA TGCTCCGAGC
TCTGGGACAG CGTCCAACGG GTAAGGTCCA GCGATACGTG GAACTCTCCA GCGTTGGTCA
CTGTCCCAAT CACGAGGCGC CAAACGCCGT AGCATACGTT TTGCTACCCT GGTTGCTTTC
GTCAAATGCA CAACGCCAAC AAATTGCATT GGTGCCAGCG CCACTCTCAG AAGACAAACG
AACGTCAGTA CGAGAAACCT GGGGGGTCAC GGAATTGACC GAACGCCAAG CCGACGACAT
TTCTTTATCA TTAGTGGATC GACTAGCCGT ACTATTTGTA TAG
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| Protein sequence | MKIIRKTLQL TIWLSACLVT SYSYSNSNVP VGKSSARNTE TSPVPISSHT FLFRSHPIAY
ETAVVRFPTK IAVPPQSPTT PYRDVSPVLL LNGFGVGSFH QHRLIQALQQ QSDQSTVTDK
NSNRDEPASL ATIIYTLDYL GQGRSWPVDS NDGQSEAELG LRYCGQTWVD QIVAFLETIV
LPARESCFSS TRHYTAPPER VHLVGNSVGG HLAVFVAALR PDLVASVTLL NATPVWGLNL
PGWTGHLPAP FLPKTIGRFL FDQIRNLNTI EQYLAAAYVH REAFDATLMQ QIRACTESQG
GHAAFASILW SPPVTLPTKP NDAPSNTKND YKKINAFDEA LSRLECDVLL CFGADDPWCK
PAFAARMLRA LGQRPTGKVQ RYVELSSVGH CPNHEAPNAV AYVLLPWLLS SNAQRQQIAL
VPAPLSEDKR TSVRETWGVT ELTERQADDI SLSLVDRLAV LFV
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