| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50640 |
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| Symbol | |
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| ID | 7199477 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011701 |
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| Strand | + |
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| Start bp | 55891 |
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| End bp | 59267 |
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| Gene Length | 3377 bp |
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| Protein Length | 1001 aa |
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| Translation table | |
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| GC content | 44% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185602 |
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| Protein GI | 219130924 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCGCGAGATA TACCAAACAC CGTCCTTTTC ATTTTGCACA TAGTCATTTT GTTGCATCTA
CAGTAAAAGA GTCAGTGTTT GCTTCAATGC TTGGAGACGG AACAAGACAA GTCCACAAGG
CCAACAATGG TCCAAGTCGA AATAATGTCT AAAATATATG GTGAGCTTGT AGCATATCCA
CCACTCCGGA TTCTGCAAAA TGGGAAGGAA CATGACCCTT ACGTTGTTGT AGATGAAGCT
ATTGAAAAAT TTGGTGCAGC AGTCAAAGAT CAAATGCTTA CAAAGGAACA AGCTTTGGTG
AAGGTGACAA AAGTTGCTAA TTCAATTGAC TGGCTACCTA CTGAACTGAA AGAACTGGTT
GATGCACACT GTCGTAAAGA CTCAGATGTT GACAATGATG GATATGTCAA TAAGATGAGA
CTTTCAATCA AGGCAAATGA ACTCTTTGGG AAGATGAAGG CCAGCACCTA TTTTGTCAAC
TTTTACCAGC TCAAGCAGGT TGCTTCACGA TTTGCCGCAC ACTGGGGATT TGTTGTTGTT
TCGTCTGGCA ACAAATTGTC ATGCTTTTTT GCCAAGAGCT CAACTAAACC ACGTGAGTCA
ATTGTGTCAC CAACAAGACA AAGAGAGCGG ACAAGCATCA AATCAAATTG TTCATTTATC
ATCCGATCAT CATCTTGTTG CAAGGATGAC ACAAAACCGC GGCATCGGAG AGCTGTGAAA
TTAACATCAT ATGAATTAGA GCACAGCACG GAATGCCATC CAGGTGTTAA GGAGCAGCGC
CTTGCAAGGA AGGCTGCTGG CATAACAATT GGTGGCTTGG ATCTGACAAA GGTCAATGAT
ATTGTGACAT TAATAGCTGC AGGAAATATC AATGCTTGCC AGATGAAGAG TTTGCTAAAA
GATCATGTGC CAGAGCACTA TGCAATTACT GCTTCTGATA TATGCAACAT CAGAAAGCGA
GCAGTCAAGT ACTCCATAGA ACAAACACCA ATAAACATTG CAACAGCACA GAAATTAATT
GATTTTGTTC CATTGGATGA GGATGAGACC ATAATCTCAA AGGATGATGA TGTGTCCAGA
GAGAAAGTGG CTGAATTTAT GAGACAGGTT CTACAGGACA CAGGTGAAGG TTGGAAGGCA
CTTGCATTTC TTGAAAAAGT GAAATCTGAG ACCATTGGCT TTGACTTCCG TGTGCATTAC
GATATTGACG TACGGCCAAT TGGCATTGTT TGGATTACCA AAAGTATGCG CAAAGCCTGG
ATCCGGTTTG GGAGCACAAT ATACCTGGAT GCTATGAAAA GGAAAATGAA CAGTCTCCAC
TGGCCATACA TTGGTCCTGT TGCAATGGAT CATGAAATGC GAGTGGTTCC ACTCTGTGAA
AGTATCTGTT TGGGGGAAAC ACTTGCCGCA TATGCATTTG CCTTAAATTC TTTGGAGCAA
ATGGAGCCAC GGCGAAAATT GGCCTCTATC CGTCTCATCT ACGCAGACTG CTTTTTAACA
GATGCACTCC TACCATTGGT AGGTCTGAAG CGCCCTTCCA CAACTCTTGC ATGGGATTCC
TTTCACCTGA AGTCAAAAGT ATGGCCAGAA TACTTTGGAC CAACCCTGTT TGACCAGTTA
AAGGCTTCAC TTGGGAAGAT GCTTTATGGA AAGTCACGCA AAGAATATGA TGAAGCATAC
CAGGAGATAG CACAAACACT GGCCCACAAC CCTGCTAAGC TTGAGTATGT GAAGGGATTG
TATGATCACC CAGAACGGTT TGCTCACCAC TTTATCAAAA CCATACCTGG AAATCTTGGC
AAATCCAGCA GTCAACCAGC AGAATCAAAC CACTCTAGTG TTGTAGCTCG AGTTGGTCCA
GGCTCATCAC AAGACATTGT CAAAGAAATC AGTGCACTTC TGTACCGACG ACAAGACTTG
GCCAACTTGC ATGAACAAGA AGACGCAAGA TATGAGCTAT TATCCTTTAA TAGGGCTTCA
AAAACCAAAA CAACCACACT ATTGCATGAT CTGTCAGATG CTGGGGCACA CAAAGCACTC
TCAAAGAGAT TCTTCAAAGA TTATTGGTGT CCTCTTTCAG AAGAGGGAAA GAGCTATACC
CATTTATGTC TTCCATGTGG CTCTCACCAA ATTTTTCACA TGGATACTCC TAAGCTGGAT
GATTTCGCCA TTGTTATAAA GAAAGGAGAG CGTTGCACTT GTTCCCAGCA AAAGGAGTTT
GGGGGTATGT GCCTGCATGA ATATGCTCTA CATAATCACA CCTTTGAACT TAGCTTGTTT
CCAGAAAGAA TGCTCCAGCC ACACTTGCAA ACAGCAATTC GTCCAACCAG CTCCAACAAT
GATACTTATG ATCATTATGG TTGCAATGAT GATGATCTAG TGTTGGTCAA GGGCAACAAT
GCTAATGAAG TCAATGTTGA TGAAGTTAAT ATTCATGCTG ACACTCGCAA TGAACCCTCC
TCTTCTGAGG ATGATAGCAT CCCATTAGCT ACATTGGCTG GTAAATGTTC TACCAACACC
AAAATGCAAC CCCAGAAGAA ACAAAAGTGT GCTGCTGTGA CTCATGCTGA AGCAACTTGT
GTTGCTGCAG CAGTGGTAGA CTACATTGTT GGTGGCAAAT CGGAAATGAG CATGGTCCTC
TATTCATCTC TTCAGCATTT GCTTGAGATT GCTCGTGGAA CAAGTGCCCG CTCAGCTGCC
AGCATAGTAC AATCTGCTAG CCTGGCTGTT GAACTGAGAA GAAAGCATCC AGCTCTGCAT
CAACCAGTGG CTGGTCCAGA GGCCAACACA GTAGGAAGGA CCCGATCCAA GAGACTAGTC
TCAAAGGTGA TGGCCACATA TGGAGGGACA TCGGTGCGTA GCTACAAAGT AAAGAATTCC
AAATGCAGCT TCTGCCACAG AGCCACATGC AGAAATATTC AAAGCTGCCA GATACTGAGG
GACCTTGGCC GGAGGATTAC AAAAGAGGAG CTTCCTCGCT TCCGGCAAAC AGAACTTTGC
TGCTCACAAG CCATCAGTGA CGGATCAAAG TTAAGTTCCC TTATTACAGC CAACAAACCT
GTGCTCATCA GCCTCCCAAG ACATACTAAA TGGCTTGTTA TTCATGGCCT GTACAATCTA
TCAGGAAGCT TGGCTGCTGC CAAAGTTTCA AACAATGTTG GGGTGGAAGT TACATGCTAT
GGCAACATGG GAACAATTAT GGAAGGACTT ATAGAAGGTG CTGCCAGCTT TGATCACAGA
GTGGCCACAT ACAGCACTGT AACAGACTGG ATTGCAACCT CTGCTTTGAC AGGAATGAAT
ACCATGACAC GGTTGATTGC AAGCAACAAA TTTAATAGCT TAACTGGTAG CATCTAATGA
CTACTTACTT GTGCTTT
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| Protein sequence | MVQVEIMSKI YGELVAYPPL RILQNGKEHD PYVVVDEAIE KFGAAVKDQM LTKEQALVKV
TKVANSIDWL PTELKELVDA HCRKDSDVDN DGYVNKMRLS IKANELFGKM KASTYFVNFY
QLKQVASRFA AHWGFVVVSS GNKLSCFFAK SSTKPQHSTE CHPGVKEQRL ARKAAGITIG
GLDLTKVNDI VTLIAAGNIN ACQMKSLLKD HVPEHYAITA SDICNIRKRA VKYSIEQTPI
NIATAQKLID FVPLDEDETI ISKDDDVSRE KVAEFMRQVL QDTGEGWKAL AFLEKVKSET
IGFDFRVHYD IDVRPIGIVW ITKSMRKAWI RFGSTIYLDA MKRKMNSLHW PYIGPVAMDH
EMRVVPLCES ICLGETLAAY AFALNSLEQM EPRRKLASIR LIYADCFLTD ALLPLVGLKR
PSTTLAWDSF HLKSKVWPEY FGPTLFDQLK ASLGKMLYGK SRKEYDEAYQ EIAQTLAHNP
AKLEYVKGLY DHPERFAHHF IKTIPGNLGK SSSQPAESNH SSVVARVGPG SSQDIVKEIS
ALLYRRQDLA NLHEQEDARY ELLSFNRASK TKTTTLLHDL SDAGAHKALS KRFFKDYWCP
LSEEGKSYTH LCLPCGSHQI FHMDTPKLDD FAIVIKKGER CTCSQQKEFG GMCLHEYALH
NHTFELSLFP ERMLQPHLQT AIRPTSSNND TYDHYGCNDD DLVLVKGNNA NEVNVDEVNI
HADTRNEPSS SEDDSIPLAT LAGKCSTNTK MQPQKKQKCA AVTHAEATCV AAAVVDYIVG
GKSEMSMVLY SSLQHLLEIA RGTSARSAAS IVQSASLAVE LRRKHPALHQ PVAGPEANTV
GRTRSKRLVS KVMATYGGTS ILRDLGRRIT KEELPRFRQT ELCCSQAISD GSKLSSLITA
NKPVLISLPR HTKWLVIHGL YNLSGSLAAA KVSNNVGVEV TCYGNMGTIM EGLIEGAASF
DHRVATYSTV TDWIATSALT GMNTMTRLIA SNKFNSLTGS I
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