Gene PHATRDRAFT_50634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50634 
Symbol 
ID7199465 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011701 
Strand
Start bp30551 
End bp32183 
Gene Length1633 bp 
Protein Length528 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185598 
Protein GI219130916 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.324652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTTCC AAATCTACGA CGGGAATAAC TCTCAAAAGC GCAAAAACGC TGCCGTAATG 
AAGGATGGCT CTTCCTCCGT CTTTCAGATT CGCCTTTGGG CGGTGTTTCT TTTCACAGCT
TTACTTGGAT CGGTATCGAT TCTACTAACG CTCTCCAGCG CTTTCACTAA TCAGATTAAT
TTCTGCTCAG AGTCTGCTCG GCAATATGAA CCAGGGCCAG TTTCTTGGAG ACAAAGCGCC
ATGGCATTTC AAGCAGTCAA AGCCCATCAA AAATTCACGG AAAAGAGTAT TCAGCGGGAA
ATGCCAGTCA CCCTTGCGCA GGCCCATCCC ACTTCATCAA TGATACTTAT TCGCGCTCTG
GGCAACGCCT TACCGCCGAG ACATAGTACG CAGCAAACTT TGGAAAATCT TGACTTCATT
CTGGCGCACG AAGAGTCGTT TCCCAACACA ACACGACACT GGTTTGTCAA TCGCTTCGTC
GATCCCGAGG TGGAACGACT AGTCCTGGAC CGACTTCAGA AGGCTAACGA ATCCTACACT
GTCATTCCAT TTGACTTGCA GGTCTACGAC AAAATTGAAT ACGCATATGA TCGGATCCCC
AAGGACCAGA TTCATCTCCC TCCTGAAACA ATAGAAGGGG AGGGACTCAC GGAGAAGGAA
ATACTTCTTA CCGAAGAGCA GATACAGCAT GACAAGATTC TATATGTCAT CAATATTAAT
GGGGTCAGGA ATGCCATGCT AGACTACGGC CGCAAACATT CCAGTGCTGA ATACATTCTT
CCTTGGGACG GTAACTGTTT CATGACGCGA AAGGCGTGGT CTTCGATCCA GTCGTCTTTG
GCCGAAAATC CGCTTGCCAG GTACTTCACA ACGCCCATGG ATCGACTCCA AGAGCCCAAC
GAAGCTCTAC TATCGGATAT GTACGTGCAC AATGCGGTGG AAGAGCCGCA GATCATTTTT
CATCGATCGG CTCGGTCCGA ATTTAATGAA AAACTTCGGT ATGGACGAAG AAACAAAGTT
GAGCTGCTTT TGAGGCTTGG TGTGTCGGGG CCTTGGGACA AATGGCCGTG GTTGGATAGT
GAGAAGGCAA TTCTGGATCC AGCCCACGCT TCTGACGCTG TTGGCGATGT ACCAGTAGCT
GGTTGGATAA CGCGGCTGTA TTCAGGAACC AAAGCTGCCG AAGTATCTGG TACAATTCGT
TTTCGAGGCA TACTTCGAAG CCATGCCGTC ACATCGCTTC TGGAACGGCT TGACCTTCGA
GCTGCACAAG ACATACACGG CTTGACTTCT TCAACATTAC TTTTCTTCAA CGAAAAGCAA
TTGATGGGGG AGCGCAACCT CTGGAAGGCA GGTGAGCAGA AAGAAGTCTT TCGAGAGCTA
GTGCAACTGG CTGACCAAGC GCTACTGTTT GGACCTTGGT CGGTTATGGA TAAGCAGCCT
TACGGCTGTG GTGTATCGGG AAATTGTCAT GAATATTTTC ACCCGTCGCC GTACAGGTGG
CCACAGAGGA ATGAATCTGG ACACATCGAC TGGTCGAAAC CGTTTGAGCG GCATGACGGT
ATGCGTGCGC CCGGTACATC CCTCTTTAGC GCCGGAAGTG AGCAGTATGA TCGATCTGGT
TTGGCTGCAA TGA
 
Protein sequence
MVFQIYDGNN SQKRKNAAVM KDGSSSVFQI RLWAVFLFTA LLGSVSILLT LSSAFTNQIN 
FCSESARQYE PGPVSWRQSA MAFQAVKAHQ KFTEKSIQRE MPVTLAQAHP TSSMILIRAL
GNALPPRHST QQTLENLDFI LAHEESFPNT TRHWFVNRFV DPEVERLVLD RLQKANESYT
VIPFDLQVYD KIEYAYDRIP KDQIHLPPET IEGEGLTEKE ILLTEEQIQH DKILYVININ
GVRNAMLDYG RKHSSAEYIL PWDGNCFMTR KAWSSIQSSL AENPLARYFT TPMDRLQEPN
EALLSDMYVH NAVEEPQIIF HRSARSEFNE KLRYGRRNKV ELLLRLGVSG PWDKWPWLDS
EKAILDPAHA SDAVGDVPVA GWITRLYSGT KAAEVSGTIR FRGILRSHAV TSLLERLDLR
AAQDIHGLTS STLLFFNEKQ LMGERNLWKA GEQKEVFREL VQLADQALLF GPWSVMDKQP
YGCGGHRGMN LDTSTGRNRL SGMTVCVRPV HPSLAPEVSS MIDLVWLQ