Gene PHATRDRAFT_50632 details

Gene Information

• Locus tag: PHATRDRAFT_50632
• ID: 7199463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011701
• Strand: +
• Start bp: 24957
• End bp: 27087
• Gene Length: 2131 bp
• Protein Length: 622 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002185596
• Protein GI: 219130911

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTAGCCACCA TGATGGTCGG CGTCGATAGT AGTCTCGTTT TGTCAACTTT AACGCTTATG 
CCGGTCGCCT AGTGCGCTCT ATGCGAGAGA AGGTCCTAAC ACCAAATATT GTCGATAGAA 
TCGCTGTTTA CAGTTAGCTG TATAGCTATA TCTGTAGAGA ATCGGTTTCC GCGAGAAGGA 
TTCATTATTT TGGGCTCTAA CCAGGGAGGT CTGTGTTAGC GAAGATTCAG TGTAGGAGAA 
ACATTTTGCA TTGCGCTTCG GTATGACTCC TTCGGCATCG TCTAAGAAGG GCAAAACTAA 
ACTCGAGGAG TTTTTTGAGG TCGCAGAACG GAGGAAATCG CTGACCTCAA TGGACCTTTG 
GCTAAAGATG ACATCATCGC AGAGCCAATT GTCAACGTTA AACCAGAGGC GAACTCATAA 
CGGCTCTTCA AAACCAAAGT CTTCGAGTTT TGCTCTTAAA GGTAATGGTC GCATGCCAAG 
AGAGTACGAG TCGGAGACAA GCTTGAAAAA TGGCCTGGCC GTGAGAAAGG AATCACACCC 
GCCTACTTGT CCGAAGGTAC ATACATCGAC ATCTATGGGA GGCATTGAAG GCATTAACAA 
TCGCCCACCC ATGTTATTAG GAGCGGGCCA TTCCTTTACG CGCACAGTGG AAGGTGCGAG 
TGCCGGTATT TCCGGCGTTG CTAGCGACGA CGACGATTCA ATTGAAATTT TGAAAGTTGT 
TCCGTCAGTG ATTGACAGTA TCGGTGCTGC CTTTCCTAGT GAAGCTCCCG TAACAGAGGA 
AGATGAAGAA CGTTGGCTGC AGCATGCAAT TAGGAAATCA TATGAAGAGA CGCGAAAAGT 
TTTGCCTTCT AAGCATTTTC CGCCACTGAC GCCCCGCACG TCTCCTAGGA TACTAGCTCG 
CAAACGAGCA CGGGCTTCGG AAAAGTATTT GGAACCTGAT ACGGAAGGAA AAGCAACAAG 
TAGCAAGTTT TTGAAGTTTT CTCCCGCTAA GTCCGTATTT CAATCAACAT CTCCGGCTGC 
ATCTAATGAT GATGACAGCA GCAAAGATAA GGCAACAACT AGCAAGGTTC CGCCTGGTGA 
TCACCTCTAT ACATTTAATG AGTTTGATCG GATGTTTGAC GATGTCTTCT TGGATTTTGG 
TATGGAAGTG ACGGATGTGG AAGAAGGCTG CCTAGTCAGG ACGGGTAACT CGAAAGTGTC 
CCCCAGCGAT ACCAAAGGAC AATCCAAAGC GCAATACGGT AGACTCTTAC CGACTGCCAC 
CCAGTACCTG CTCGCGGATG CACTGTGTGT AACAAAAAAG GACACATTCG TTGATATTGG 
ACATGGTATT GGTAATGCAG TCATCCAAGC AGCCTATACA ATGGGCTGCG AATCGCGCGG 
TATAGAAGTT ATGGCCGGTC GCAATTTGGT GGCCGAGCTC ATTATGGAAA ATTTAGAAGG 
ACAACGAAAA GTACATCATG AGCGAGATAA TAGGAGCGTG ATTGTTGGAA AAATTCTGCT 
GCGGCATGGT CGTTTAGAGG TCCCTGAACA CCGCACATTT TTGACCAATC CAGAAGGTGT 
AACCAAGGCT TTTCTTGACA ATTTCAATGG CGTGTTTGCG GATCGATCGG CCAAGCTACG 
ACAACGGTAC ACACTAGACC AATACAATGC CGGACTGTTT GCATTGATGA AACCCGGATC 
AATGCTAGTT GCTTTGCACA AGTTAGACCT AGGTCCAACA TATTTGGAGG CCAACACCTA 
TCGGAAGCGA CACAATTTAG CCAATCAGGA CAATATCTTG GCTTCATTTT ACGCTCTGGA 
AGAATTCAGC TTTGGACCTG CATGTAACGC TGTGACTTGG TCACAAGGTG GTGGTTGTAC 
AGATGCTATA ATTGGGTACA AGTATACCAG GCTAAATCAG AAGACGCCAG AAGGCAAGGC 
CGTGTTTCTG TGCTGCAATC GTGATTGTGA CATAGCTCGT GCGGGAACAC CAATTGATGC 
CACGCGCCTA GTGGAGTCGG ATGAGGGGGA TGGTACACGG GTTGTAATTA ATACATGCAT 
TTGCAAATAC ACACCAATTG CACCTCGATC GGGACGTAAC AGGAGGCCAA GAAAGTTCAG 
GGAATCATTG TCGGAAGAAT CAGATAGTTG A 

 

Protein sequence

MTPSASSKKG KTKLEEFFEV AERRKSLTSM DLWLKMTSSQ SQLSTLNQRR THNGSSKPKS 
SSFALKGNGR MPREYESETS LKNGLAVRKE SHPPTCPKVH TSTSMGGIEG INNRPPMLLG 
AGHSFTRTVE GASAGISGVA SDDDDSIEIL KVVPSVIDSI GAAFPSEAPV TEEDEERWLQ 
HAIRKSYEET RKVLPSKHFP PLTPRTSPRI LARKRARASE KYLEPDTEGK ATSSKFLKFS 
PAKSVFQSTS PAASNDDDSS KDKATTSKVP PGDHLYTFNE FDRMFDDVFL DFGMEVTDVE 
EGCLVRTGNS KVSPSDTKGQ SKAQYGRLLP TATQYLLADA LCVTKKDTFV DIGHGIGNAV 
IQAAYTMGCE SRGIEVMAGR NLVAELIMEN LEGQRKVHHE RDNRSVIVGK ILLRHGRLEV 
PEHRTFLTNP EGVTKAFLDN FNGVFADRSA KLRQRYTLDQ YNAGLFALMK PGSMLVALHK 
LDLGPTYLEA NTYRKRHNLA NQDNILASFY ALEEFSFGPA CNAVTWSQGG GCTDAIIGYK 
YTRLNQKTPE GKAVFLCCNR DCDIARAGTP IDATRLVESD EGDGTRVVIN TCICKYTPIA 
PRSGRNRRPR KFRESLSEES DS