Gene PHATRDRAFT_41647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41647 
Symbol 
ID7199470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011701 
Strand
Start bp59835 
End bp60317 
Gene Length483 bp 
Protein Length160 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185610 
Protein GI219130941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.070225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCAGCA GCGTGTACAT GGTATCCGAC GTGTGCATAA AGGGCCGTGG GACGGTGGCG 
GTAGACAATG CCTATTCGCG GGCGGACTGG AAGACGACAA AGTCGTTTTC GGAAACGTTA
AAGCACAGAA AGTCGAAGCA ATTCAAGCGT TGTTTCTACA CGTTTCCCAC ACAGTGTATG
TTGGAATGGA GATTGGGTGT GGCTGTTCGT GCATACAGCG GAACGCCGAA GGCACCGTCC
GGGGGTCCAC TATCCGGAAT GGAAACGTTA AAGCACAGAA AGTCGAAGCA ATTCAAGCGT
TGTTTCTACA CGTTTCCCAC ACAGTGTATG TTGGAATGGA GATTGGGTGT GGCTGTTCGT
GCATACAGCG GAACGCCGAA GGCACCGTCC GGGGGTCCAC TATCCGGAAT GGGTCGTTTC
CGCAACGTGA TGGAGGTTGC GCGACCTGCG CAACCAGTTA TGGTTGTGGA GCATACTGTG
TAG
 
Protein sequence
MCSSVYMVSD VCIKGRGTVA VDNAYSRADW KTTKSFSETL KHRKSKQFKR CFYTFPTQCM 
LEWRLGVAVR AYSGTPKAPS GGPLSGMETL KHRKSKQFKR CFYTFPTQCM LEWRLGVAVR
AYSGTPKAPS GGPLSGMGRF RNVMEVARPA QPVMVVEHTV