Gene PHATRDRAFT_41639 details

Gene Information

• Locus tag: PHATRDRAFT_41639
• ID: 7199464
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011701
• Strand: +
• Start bp: 27642
• End bp: 29678
• Gene Length: 2037 bp
• Protein Length: 678 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002185597
• Protein GI: 219130913

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.627134
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGACG AATCAAATGT GCATGAGGAG GCAGCTTTTC AGGATCACGT ATCGTCTAGT 
GAACACTCTC AGAAAGCACG TGAACGTCGA CACCCCGTCG CAATCGCAAA CAACGCAGAG 
GGTAAATCTT CGGCTGAATT TTCCGATCAA ACGATTACAC AAACGACCGC AGCCGATTCA 
GTTTCAGACC TGATCGGCGG CGAAGACTAT GAGACTCCAG TTGTGCCTTA CGCCAATCTG 
GGCAATCCTA CGCTTTTTGA ACAAGCTGAG ACCAAGCATT TCTCTTCGCA AAAGAATAGT 
GACGATATTT CTGACACGGT TGAAACTCAT TCGAGCGCGG CCACCCAAGA CAATCCGGAT 
AGGAATAGGG AGAGTTTGAT CAAAATCAAC ACGTTGTCCA GCGATAGCGG TAGTCCACCC 
TCTGGTGACG AGGCACAAAT GAGCACGGAA AGTACATTCC AACAACCCAG ATCGCGAGGG 
GGCTACGTGG ATCAAGAGAG AAGTTCACCG ATGACAATCA TTCCAAGTGA CTCTCTCAAA 
ACCGACGTCA GATCAGAAAT CTTTGCGCTG GAGCACACGC AGTCCCACAG TCAATTGGAG 
TCGATCGACG CGGAGCTCAA AGCCGCAAAA GCGGCAACGG AGGTAGTGGA TGATTCTTTA 
GAAGAGGAAG TCCGAGCTAT GCGAGCTGAA GGGTCGACAT CGGGTCGGCA GGCCTGTAAT 
CTAGATTCTA AGCGAGTCTT CGTGACCGAT GACGCTGTCT TAGCAGAATC GGATGCCTCA 
AATGAACTGG AGCTGCTAGA ACACCCGCGT TTGGAGTTTT CGCAAATATG CGGCAGACCC 
GAATTCGAAA AATACGAATT TCCGGACGAG GAGACGCGAA AAGGCGACGC GGAGGAACAA 
GAGAACAAGT ACAAGAGAGA TGAAGTAGCA ATCAAACACA GTATACTTGA AACAGCGGGG 
AGTCACAGCG AGTGGACGGA GCAATTGAGG GACGAAACCG GCAAATCTCT GATCCCAAAA 
GAGACCGAAA AGCAGGACAA CCCACACAAA GAAAACTCTG TTGTGGGGGA AGAAGCCATG 
ATACCGACCA ATTCACGTAT GGAAAACGAA GATACACAGG AAAATTCCAA ACCATCGGAA 
CCTGCCGTTG CTTCAGAAGC TAAGCCATCC CTCAAAGCTG GTTCGTTCGC TAGCCATATC 
GACAAAGTAA CTTACGACGA AATGGAAAAT TCCTTTGCCG GTGCAAATGA GCACTCCGGC 
GCAGTGATAG CCCAATCAAT GAAGCAAGAC ACTGTTGCCC ACGAACTTCA GACTCCATTT 
TGTGGTGTTT GGGGGGCGGT ACATGGGGAA CGAAAGCTCG CCGATTTGTC GGTTCTCGTT 
TTATTGTTTG AAAACTTGCT TTCTGACAAG AACGACGACA ACGATGCTCG AAACGCGGCT 
GAATTGGCTT TACTTGAGCG AAAATTCGAA GATCTTATGG ACGCGGATTA TTTTTTGGCT 
GAAAGTGTGC CCTCAAGTAT TGAGAACATT GCTGAATCAC AGGTCCCCAT GGCGAAGTCT 
ATCAGGAATG AGTTTGTTGA TGGACTAGAT GACATAGATA AATTTTTCGA AGACATCGAT 
CCTCCGGACG AGTTGGATGT TGGAGCTGGT GGATCGTCTA TACAGGAAGT CCTGATGGGA 
CAAGGTAGTC GAATCATTCT TAAACGGCTA GTTATAGCAG CTAAAGTCGT TCGAGACACC 
GCGGTTGAGA TTAAGAGGAC GCTACTGACA AAAATCGCGG ACGACGACGG TTCGTTCAGC 
ATGGCGCGGA GGGAAAAACT TTACGGTATA TTGAGGACAA TACGGAGGCT AACCCGTAAG 
AGCATTGAAG CTTTTCGTCG TTTCATTGAA GGACTCTTGG AAGGTGATGT TTTCGATGGA 
GAGGATTTTG TCCTTGACTT CACAGTCAAT CCAAATCCGC CCAGCGAGGC GGACGCAGAC 
CCGGGAAAAA AAGCATTTCG TCAGCAATCA CAGTCAATAA ACGGTCGAGC TAACTGA 

 

Protein sequence

MPDESNVHEE AAFQDHVSSS EHSQKARERR HPVAIANNAE GKSSAEFSDQ TITQTTAADS 
VSDLIGGEDY ETPVVPYANL GNPTLFEQAE TKHFSSQKNS DDISDTVETH SSAATQDNPD 
RNRESLIKIN TLSSDSGSPP SGDEAQMSTE STFQQPRSRG GYVDQERSSP MTIIPSDSLK 
TDVRSEIFAL EHTQSHSQLE SIDAELKAAK AATEVVDDSL EEEVRAMRAE GSTSGRQACN 
LDSKRVFVTD DAVLAESDAS NELELLEHPR LEFSQICGRP EFEKYEFPDE ETRKGDAEEQ 
ENKYKRDEVA IKHSILETAG SHSEWTEQLR DETGKSLIPK ETEKQDNPHK ENSVVGEEAM 
IPTNSRMENE DTQENSKPSE PAVASEAKPS LKAGSFASHI DKVTYDEMEN SFAGANEHSG 
AVIAQSMKQD TVAHELQTPF CGVWGAVHGE RKLADLSVLV LLFENLLSDK NDDNDARNAA 
ELALLERKFE DLMDADYFLA ESVPSSIENI AESQVPMAKS IRNEFVDGLD DIDKFFEDID 
PPDELDVGAG GSSIQEVLMG QGSRIILKRL VIAAKVVRDT AVEIKRTLLT KIADDDGSFS 
MARREKLYGI LRTIRRLTRK SIEAFRRFIE GLLEGDVFDG EDFVLDFTVN PNPPSEADAD 
PGKKAFRQQS QSINGRAN