| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55215 |
|---|
| Symbol | HSP90 |
|---|
| ID | 7199346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011699 |
|---|
| Strand | - |
|---|
| Start bp | 67147 |
|---|
| End bp | 69767 |
|---|
| Gene Length | 2621 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | heat shock protein Hsp90 |
|---|
| Protein accession | XP_002185513 |
|---|
| Protein GI | 219130734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCGGTCTTCA ATTTTCTTCC ATCTCACAGT CAATCATACC ACCGAAGCGA CGATGAAGTT
TTCTTCGCTA GCAGTTTTCG CGCTCGCCAC CGCGGCCTCG GCTTTTGCTC CGGCAGCCTT
TCGACCGAGC AGTGCTGCTT TTGGCGTGGC ACAGTCAAAA GGACCTTTGG CAAGCCGACG
TTCGGCCGAT GCACTCTTCA TGAGTTCCAC GGAGGCCGCT TCGAAGGAAA GCTTTGAATT
TACGGTACGT TCATGAAAGA CCAAAGAGGT ACTTTGCCTT AATCGCTCTT TCTGGCATCT
GACAATCCGG TCTTGCCGCG TTTTCTACAG AGCGATGTCG GCCGAGTGAT GGATCTGATC
ATCAACTCGT TGTATTCCGA CAAAGATATC TTTCTTCGCG AACTCATTTC CAACGCCGCC
GACGCCTGCG ACAAGAAGCG ATTCCTTAGT ATCACCGAGG CGGGTGAGGA TGTCTCCGTC
AAGCCTGAAA TCAAAATTAA ACCCAACTTT GACGAGAACA CTATCACGAT TGAAGACAGC
GGTGTGGGTA TGACGAAGGA CGAACTCATC AACAATCTTG GTCGTATCGC ACAGTCTGGT
ACCCGCAATT TTTTACAAGC ACTGGGTGAT GGATCGGCAG ATGTCACTTT GATTGGGCAG
TTTGGTGTGG GTTTCTATTC TGCTTACCTG GTGGCCAACA AGGTCGAAGT GGTGACCAAA
TCCTTACAAG ATGGTTCTTC ACAATACCGG TGGTCGTCCG ATGCGGGCAG CTCATACACA
ATTGAGAATG ACACGTCCGA CCCTATTGAC GGCTCGGGAA CCCGAATCGT TTTACATTTG
AAGGATGAGG CTTCCGAATA TTTGGAATCT TCAAAGATGC AGGAACTTCT GCAACGGTAC
TCAGAATTCA TTGAGTTTCC GATTTCTATC TGGAAGGAGA CGACTGAATA CAAAAAGGTT
CCCGACGAAG AAGCCAATAA AGATTTGCCA GAGGGCGAGG AACCGAAAAT GAAGACAGTC
CCGGAAACAA AAGAGGGGTA CGAGCGCGTC AACAACCAAA AGCCGATTTG GCTGCGACCA
CCTCGTGAAG TCGAGGAAGA CGAGTACACG GACTTTTACA AGTCGGCTTT CCGTGCCTCG
TACGACGATC CCATGAAATG GACGCACTTT GTGCTTGAAG GACAAGTGGA ATGCAAGGCC
TTACTCTACA TTCCTGGTAT GCTTCCGTTT GAACTTTCTA AGGACATGTT TGACGAAAAT
GCACGGAATA TTCGACTATA TGTCAAACGG GTCTTTATCA ACGACAAGTT TGAAGACCTG
ATGCCACGCT GGCTCAAGTT TGTCCGTGGT GTAGTTGACA GTAACGACTT GCCTCTGAAT
GTGAGCCGTG AGATTCTGCA AAAATCAAAG GTGCTTTCCA TCATTAATAA GCGTTTGGTA
CGCAAGTCCT TGGATATGAT TCGAGACATT GAACAGGACG AAGACGAGGG GCAGTATGTA
ATGTTCTGGA ATAATTTTGG CAAGTACCTA AAGGTCGGTG TCATCGAAGA CGACGCCAAC
CGCAAGGAAA TTGCGCCGTT GTTGCGCTTC TTCTCGAGCC AATCGGGCGA AGAATACACC
TCGCTAGAGA AATACGTCGA GGCCATGCCC GAGGGGCAAA AGTCGATCTA CTACGTAACT
GGTGACGGCC GAGAAAACGC GTCCATGTCT CCCGTCATTG AAAAACTCGC GTCGAGAGGT
TACGAAGTTT TGTTTGCCAC GGAACCATTG GACGAAATTA TGATGGAAAG TCTCCGTAAC
TACAAAGACA AAGATGTCGT CGACGCCGCC AAGGAAAACC TTAATTTGGA CGATTCGCAA
GACGAAGAGT CGAAAAAGAA GAAGGAACAA CTGAGAGAAG AGTACAAACA AGTAGCGGAA
TATCTAGAGA CCCTCCTCAA GGGCAAAGTA CAAAAGGTGG TGATTTCTGA TCAATTAACT
GACTCGCCCG CAGCCTTGGT GCAGGGCGCG TACGGCATGA GCCCGACCAT GCAACGATAC
ATGCGTGCCC AATCTGTCGC TTCGGGCGGT AACGGTGACT TACCGGGAAT GAACCAAGCT
GTTATGGAAG TGAACCCGAA TCATCCCATT GTGAGGGGTT TGGATCGAAT GATCAAGGTC
GACAAGGAGT CAACGGAGCT GCAGGACCGG GCACTTTTGA TGTATGACGT TGCTGCCATG
ACGAGCGGCT ACGAAGTGGG TGACATGAAG AGCTTTGCGG CGCGTGTCAT GGGTCTCATG
GACACCGGAG TTGGTGGCAT ATCCGACGCT GAGATCATTA GTGAAAGTCC GACGCCCACA
GAAACGGAAG AACCAAAGAT GGAAGCAAAG ATGGAAGACA AAAAAGAAGA CACGAAAGAA
GAGAAAACAA CAGCTGACAG TACAAGCGCA GAGGCCGTTA CTGCGGAAGT AATGAGCGAC
GACGAAAAAA AGGCTAGCTA GAGTGTTTAG GGTAGAGAGT GACTGCGAAT AGCAACAGTA
CTGCCTGTAG AAAAGCAACC AAAAAAGCGG ATTACATCGA ATACAAAGGG ACGGAGAAAA
AGCCTAGTTG TGTTTTAAGT AAAATTACAA TTTGAATAGC G
|
|---|
| Protein sequence | MKFSSLAVFA LATAASAFAP AAFRPSSAAF GVAQSKGPLA SRRSADALFM SSTEAASKES
FEFTSDVGRV MDLIINSLYS DKDIFLRELI SNAADACDKK RFLSITEAGE DVSVKPEIKI
KPNFDENTIT IEDSGVGMTK DELINNLGRI AQSGTRNFLQ ALGDGSADVT LIGQFGVGFY
SAYLVANKVE VVTKSLQDGS SQYRWSSDAG SSYTIENDTS DPIDGSGTRI VLHLKDEASE
YLESSKMQEL LQRYSEFIEF PISIWKETTE YKKVPDEEAN KDLPEGEEPK MKTVPETKEG
YERVNNQKPI WLRPPREVEE DEYTDFYKSA FRASYDDPMK WTHFVLEGQV ECKALLYIPG
MLPFELSKDM FDENARNIRL YVKRVFINDK FEDLMPRWLK FVRGVVDSND LPLNVSREIL
QKSKVLSIIN KRLVRKSLDM IRDIEQDEDE GQYVMFWNNF GKYLKVGVIE DDANRKEIAP
LLRFFSSQSG EEYTSLEKYV EAMPEGQKSI YYVTGDGREN ASMSPVIEKL ASRGYEVLFA
TEPLDEIMME SLRNYKDKDV VDAAKENLNL DDSQDEESKK KKEQLREEYK QVAEYLETLL
KGKVQKVVIS DQLTDSPAAL VQGAYGMSPT MQRYMRAQSV ASGGNGDLPG MNQAVMEVNP
NHPIVRGLDR MIKVDKESTE LQDRALLMYD VAAMTSGYEV GDMKSFAARV MGLMDTGVGG
ISDAEIISES PTPTETEEPK MEAKMEDKKE DTKEEKTTAD STSAEAVTAE VMSDDEKKAS
|
|---|
| |