Gene PHATRDRAFT_50583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50583 
Symbol 
ID7199403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp189828 
End bp191245 
Gene Length1418 bp 
Protein Length302 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185540 
Protein GI219130790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGTTACCTTG GAGATATTGG CGGACTCTCT CATACTAGCC AATAGAGCTA CTAGAGATTA 
CCACAAATAC TGGTTCAACT GTTGTACCTG CTTCCTCCAT AGATAGAGAC GGGAACTACG
GAAAAGAATC GGGAAGAAAA GTCGATGCGT ACGGGGCTGC AGGGTATGTG CGCATCATTA
ACACAAAGGC CATCTGCAAC GCATGATTTC GCCACGTGAA GTTCTCGAAT CCATGGCTTT
TGGCCAATCA CCCGGTCAAG AGAGCGGGGG AGAGGTTGTT AGTAGTCGAC TGCAGCCTAA
AGCCCAGCCT CCGGCAGATC CGCCGCCGCT GTATACAGAA GGCAGAAATG AACCGGTATC
AGAGCACGAC CCGCTGCTTC TACCAAATAG TTACCAGCAC GGTAGCCACC CCCATGAACA
TTCACGACAA GCTGCGTTAC CCACAATTCA AAACTTTCAA GACAGTGACG TACCTGCAGA
TTGGAGCTAT TCGTACGGGT TTCGCGGAGA CGTGTCAATT CGACCTAATA CCGGTGAAAC
CAATTCTTAC GACTACGCTC TTTTTGGCTT GGCGCTTCAC GAACTTCTGG AACAGCTGCG
ATTGGCAAAT ATGATTGCCG CGTCCCTGAC AATCGTCATG CTGGCATCGA CTTGGCTTCT
TAAAGTAATC ATGGTGCAGT GGACCAAGGC TGTGCTGAGC GGGTTTCTCG TTTGTTTTGC
GTTGACACTC TTATTGGTGG AATGCATGAA CATCTGGAAG GTACCGTCCA TCGACAAGCC
GTTGCGCGAC AATTTTGGAT TGATATACCA CCCGGTTGGA AAAGCAATTT ATCTTCTAGG
AACCGCATCA TTCTGTTGGG CTCTCGGTGG TATTTGGGAA ACGATTCTAG GAGCGGTATA
CTGTACGACC GGAGGAATTC TGTGGGTTGC TTGGATCATT TATCCCGAAT TTCGCAGACC
TTACGAAACG GATGATGATG CTGACGTAAT ACAGTATACT GGCCCACGGT CAGCGTCTTG
GTCGTATTAC TCTACCAGCG TTTCGGCTTC TGTAGGAGAA ACATCGGATT GCTGGAACTG
TCCGACGTTA CAGCATCAAG ACACGGTCTA GAACAGGAGC CATCATAAAC ACAATCTACG
GAGAATAGAC CTGTTGCTGT CCTCTGTAGA TCGCGTGGAA ACTTGCACCT CTAACAGGAT
CGTTACTTTC TCGTCAGAGA GGCTCGTTTG CATGGAAGCC GTATCCTTTA AAATCTTGAT
GGTCACAGCT TCTTTCGATA CCCCTGCTGG ACTACGCTGA CGGCACTAGA GTGGATTACT
AATTTAGAAT GGTCTGCCTC TCCTTGTACA CGGTCGGCTG ACAGTGATCC GTTTAAGCTA
TTCGTGACTA ACGTAAATCC GGCCAAAATC CATGTCAC
 
Protein sequence
MISPREVLES MAFGQSPGQE SGGEVVSSRL QPKAQPPADP PPLYTEGRNE PVSEHDPLLL 
PNSYQHGSHP HEHSRQAALP TIQNFQDSDV PADWSYSYGF RGDVSIRPNT GETNSYDYAL
FGLALHELLE QLRLANMIAA SLTIVMLAST WLLKVIMVQW TKAVLSGFLV CFALTLLLVE
CMNIWKVPSI DKPLRDNFGL IYHPVGKAIY LLGTASFCWA LGGIWETILG AVYCTTGGIL
WVAWIIYPEF RRPYETDDDA DVIQYTGPRS ASWSYYSTSV SASVGETSDC WNCPTLQHQD
TV