Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50583 |
Symbol | |
ID | 7199403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | - |
Start bp | 189828 |
End bp | 191245 |
Gene Length | 1418 bp |
Protein Length | 302 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185540 |
Protein GI | 219130790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGTTACCTTG GAGATATTGG CGGACTCTCT CATACTAGCC AATAGAGCTA CTAGAGATTA CCACAAATAC TGGTTCAACT GTTGTACCTG CTTCCTCCAT AGATAGAGAC GGGAACTACG GAAAAGAATC GGGAAGAAAA GTCGATGCGT ACGGGGCTGC AGGGTATGTG CGCATCATTA ACACAAAGGC CATCTGCAAC GCATGATTTC GCCACGTGAA GTTCTCGAAT CCATGGCTTT TGGCCAATCA CCCGGTCAAG AGAGCGGGGG AGAGGTTGTT AGTAGTCGAC TGCAGCCTAA AGCCCAGCCT CCGGCAGATC CGCCGCCGCT GTATACAGAA GGCAGAAATG AACCGGTATC AGAGCACGAC CCGCTGCTTC TACCAAATAG TTACCAGCAC GGTAGCCACC CCCATGAACA TTCACGACAA GCTGCGTTAC CCACAATTCA AAACTTTCAA GACAGTGACG TACCTGCAGA TTGGAGCTAT TCGTACGGGT TTCGCGGAGA CGTGTCAATT CGACCTAATA CCGGTGAAAC CAATTCTTAC GACTACGCTC TTTTTGGCTT GGCGCTTCAC GAACTTCTGG AACAGCTGCG ATTGGCAAAT ATGATTGCCG CGTCCCTGAC AATCGTCATG CTGGCATCGA CTTGGCTTCT TAAAGTAATC ATGGTGCAGT GGACCAAGGC TGTGCTGAGC GGGTTTCTCG TTTGTTTTGC GTTGACACTC TTATTGGTGG AATGCATGAA CATCTGGAAG GTACCGTCCA TCGACAAGCC GTTGCGCGAC AATTTTGGAT TGATATACCA CCCGGTTGGA AAAGCAATTT ATCTTCTAGG AACCGCATCA TTCTGTTGGG CTCTCGGTGG TATTTGGGAA ACGATTCTAG GAGCGGTATA CTGTACGACC GGAGGAATTC TGTGGGTTGC TTGGATCATT TATCCCGAAT TTCGCAGACC TTACGAAACG GATGATGATG CTGACGTAAT ACAGTATACT GGCCCACGGT CAGCGTCTTG GTCGTATTAC TCTACCAGCG TTTCGGCTTC TGTAGGAGAA ACATCGGATT GCTGGAACTG TCCGACGTTA CAGCATCAAG ACACGGTCTA GAACAGGAGC CATCATAAAC ACAATCTACG GAGAATAGAC CTGTTGCTGT CCTCTGTAGA TCGCGTGGAA ACTTGCACCT CTAACAGGAT CGTTACTTTC TCGTCAGAGA GGCTCGTTTG CATGGAAGCC GTATCCTTTA AAATCTTGAT GGTCACAGCT TCTTTCGATA CCCCTGCTGG ACTACGCTGA CGGCACTAGA GTGGATTACT AATTTAGAAT GGTCTGCCTC TCCTTGTACA CGGTCGGCTG ACAGTGATCC GTTTAAGCTA TTCGTGACTA ACGTAAATCC GGCCAAAATC CATGTCAC
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Protein sequence | MISPREVLES MAFGQSPGQE SGGEVVSSRL QPKAQPPADP PPLYTEGRNE PVSEHDPLLL PNSYQHGSHP HEHSRQAALP TIQNFQDSDV PADWSYSYGF RGDVSIRPNT GETNSYDYAL FGLALHELLE QLRLANMIAA SLTIVMLAST WLLKVIMVQW TKAVLSGFLV CFALTLLLVE CMNIWKVPSI DKPLRDNFGL IYHPVGKAIY LLGTASFCWA LGGIWETILG AVYCTTGGIL WVAWIIYPEF RRPYETDDDA DVIQYTGPRS ASWSYYSTSV SASVGETSDC WNCPTLQHQD TV
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