Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50578 |
Symbol | |
ID | 7199401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | + |
Start bp | 179032 |
End bp | 180465 |
Gene Length | 1434 bp |
Protein Length | 236 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185496 |
Protein GI | 219130699 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTCC ACGAAGTTAC TTTGCACGTG TACCAGCTAG CGCCGGAAGG GCATGCGTTT TTTACGGGAG TTTTGCCGAG CCTCGGCCTG GGCGCGTACC ATACGTGCAT TGAGATTGAT CAAAGTCGCT ACACATTCGC ACCGAAAGTA GGGATCGTGC GTTCCAGCGC ACGTCACGAA CACGCTCCCA CCGGAGCTGT TTGGAAAGAA GCCATTGTCT TGGGATCCTG TCGACTCGAG CGAGGCAGAG TGGCACGCAT TGTCCGCATA CTGCAGGACC GATTCTTCGG TCAATTCGCG TATCATTTGG TACACCGCAA CTGCAACCAC TTTACCGAAA CAATGGCAAC CGCCTTGCTC TGTCACGACG AAATCATCCA ATCGGCTCTT TCGGGAAACG CAGAAACCAA CGACAATGCC TTGCGTCCCC TAGTTGGTGC GTTGCGCACG TTTCCTACCT ACATCAATCG ACTCGCCAAT ACGTCCGGTC ACTTTGTGTC ATACGAGGCC AATACAATCC CTTGCCAAGT AGGCCAGGAA GCTGCCCATG CCGTTGTTGC ATCTCAAGAC ACGTCAGTCG AGAAAGCGTC CCGATCAGCC TCCACCCGGA CGTCGGCCCT AGATACATCC GCGAATCGCA CTGCCACTAA GAAAGTTCTG ACCGATCGAC AAAAAGCAGC ATTGGCAAAA ATCAGAAAAA CACCAGCGTG AGATTATCTA CGACGGAAAG GTCACCAAGT TTCAGGGATT TGGGTTAAAG GGCCCCGACT CGACCAACAT CACTGGCAAC GCTATCAACA GCACGGCCCG TTCCTTCTCC AACGATAATA TGCATCAATC GAAGCCGCAG GCCGAAAGTT CCAGAATCTA TTTCTTATCA ATAGTTGTTA CCGTACAAAG GCTTGTGGGC TAGTGATCAA TCATGTCACG AGGTCGACCA AATAAGTGTG AAAAACCTGA ATGAAGTGAA AGGGCCTGTC GGAAAAGTGG TGTCGATCAA ATTGAGGTCA GCCAGGTTTT GTAGTCGAAG TAGCCGCTCA CCAGGAAAGT TTTTAAACAT CATTGCTATC GAAGAGGTCC TGTCAAGTTG CACAAGCGAT TGTCTTCTAG ACTACTTTAC AGTTATTGAA GAGTACCCCA AGTGGAAGGA AGGTTACTGG ATGCAAATTT ATACCAGGGG AAGTGAGCAC GGGGAAATCA CAATGGACCC ATCACGGTGA GCAGAATACA GAGTAAATGT TGTGCTTCTT CTTGGAGACT GCCTTTCTCT CCATTTCGCA AGTTGGTGCC TTTCATTGCT CTAAGCCACA ATCTTGTGGA CCAGACATCT CTGGTTCTTC CCAATGCCAG TAGCCGCTCT TTCCTTCGCA TGGGTACTCT CAATTTGTAT CCGAATTTCT GTCCTTTCTT ACAGTTAATG CACAAGCTTC CTAG
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Protein sequence | MTVHEVTLHV YQLAPEGHAF FTGVLPSLGL GAYHTCIEID QSRYTFAPKV GIVRSSARHE HAPTGAVWKE AIVLGSCRLE RGRVARIVRI LQDRFFGQFA YHLVHRNCNH FTETMATALL CHDEIIQSAL SGNAETNDNA LRPLVGALRT FPTYINRLAN TSGHFVSYEA NTIPCQVGQE AAHAVVASQD TSVEKASRSA STRTSALDTS ANRTATKKVL TDRQKAALAK IRKTPA
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