Gene PHATRDRAFT_50578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50578 
Symbol 
ID7199401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp179032 
End bp180465 
Gene Length1434 bp 
Protein Length236 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185496 
Protein GI219130699 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGTCC ACGAAGTTAC TTTGCACGTG TACCAGCTAG CGCCGGAAGG GCATGCGTTT 
TTTACGGGAG TTTTGCCGAG CCTCGGCCTG GGCGCGTACC ATACGTGCAT TGAGATTGAT
CAAAGTCGCT ACACATTCGC ACCGAAAGTA GGGATCGTGC GTTCCAGCGC ACGTCACGAA
CACGCTCCCA CCGGAGCTGT TTGGAAAGAA GCCATTGTCT TGGGATCCTG TCGACTCGAG
CGAGGCAGAG TGGCACGCAT TGTCCGCATA CTGCAGGACC GATTCTTCGG TCAATTCGCG
TATCATTTGG TACACCGCAA CTGCAACCAC TTTACCGAAA CAATGGCAAC CGCCTTGCTC
TGTCACGACG AAATCATCCA ATCGGCTCTT TCGGGAAACG CAGAAACCAA CGACAATGCC
TTGCGTCCCC TAGTTGGTGC GTTGCGCACG TTTCCTACCT ACATCAATCG ACTCGCCAAT
ACGTCCGGTC ACTTTGTGTC ATACGAGGCC AATACAATCC CTTGCCAAGT AGGCCAGGAA
GCTGCCCATG CCGTTGTTGC ATCTCAAGAC ACGTCAGTCG AGAAAGCGTC CCGATCAGCC
TCCACCCGGA CGTCGGCCCT AGATACATCC GCGAATCGCA CTGCCACTAA GAAAGTTCTG
ACCGATCGAC AAAAAGCAGC ATTGGCAAAA ATCAGAAAAA CACCAGCGTG AGATTATCTA
CGACGGAAAG GTCACCAAGT TTCAGGGATT TGGGTTAAAG GGCCCCGACT CGACCAACAT
CACTGGCAAC GCTATCAACA GCACGGCCCG TTCCTTCTCC AACGATAATA TGCATCAATC
GAAGCCGCAG GCCGAAAGTT CCAGAATCTA TTTCTTATCA ATAGTTGTTA CCGTACAAAG
GCTTGTGGGC TAGTGATCAA TCATGTCACG AGGTCGACCA AATAAGTGTG AAAAACCTGA
ATGAAGTGAA AGGGCCTGTC GGAAAAGTGG TGTCGATCAA ATTGAGGTCA GCCAGGTTTT
GTAGTCGAAG TAGCCGCTCA CCAGGAAAGT TTTTAAACAT CATTGCTATC GAAGAGGTCC
TGTCAAGTTG CACAAGCGAT TGTCTTCTAG ACTACTTTAC AGTTATTGAA GAGTACCCCA
AGTGGAAGGA AGGTTACTGG ATGCAAATTT ATACCAGGGG AAGTGAGCAC GGGGAAATCA
CAATGGACCC ATCACGGTGA GCAGAATACA GAGTAAATGT TGTGCTTCTT CTTGGAGACT
GCCTTTCTCT CCATTTCGCA AGTTGGTGCC TTTCATTGCT CTAAGCCACA ATCTTGTGGA
CCAGACATCT CTGGTTCTTC CCAATGCCAG TAGCCGCTCT TTCCTTCGCA TGGGTACTCT
CAATTTGTAT CCGAATTTCT GTCCTTTCTT ACAGTTAATG CACAAGCTTC CTAG
 
Protein sequence
MTVHEVTLHV YQLAPEGHAF FTGVLPSLGL GAYHTCIEID QSRYTFAPKV GIVRSSARHE 
HAPTGAVWKE AIVLGSCRLE RGRVARIVRI LQDRFFGQFA YHLVHRNCNH FTETMATALL
CHDEIIQSAL SGNAETNDNA LRPLVGALRT FPTYINRLAN TSGHFVSYEA NTIPCQVGQE
AAHAVVASQD TSVEKASRSA STRTSALDTS ANRTATKKVL TDRQKAALAK IRKTPA