| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50575 |
|---|
| Symbol | |
|---|
| ID | 7199360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011699 |
|---|
| Strand | - |
|---|
| Start bp | 167551 |
|---|
| End bp | 170054 |
|---|
| Gene Length | 2504 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185535 |
|---|
| Protein GI | 219130780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTC GTCTTTTTCG CAAACAAAAG AGTGCCGTGA GTTCCAAACA GAGCAGTAGT
ACTCGCAGTA GTACCCAAAA GAGTCTCCCA CCCACATCGC GGGAAACGCC CGAGTCTCCG
AGAGCGAAAC ACTCTTCCTC AGCATCCGCC GCTGTTTCCG CACTCTCCTC GCTTCCACCC
TACGATGAGT CCGGCAAGAA ATCGAGCATG ATCTTGAATC CGCGGACAGG CGGCTACGAG
GCTCCTTCCC AAGTAGCCTC GTATGAAGAT AAGCAATTGG ATGATGATGA TACCTTGCTG
GATGCCTCCA TTTACACCGA CGGGTACACG ATTGAAGCAC CTTCTTCGCA GAAAAAGTCC
AAATCTGCTC TCACGCCCAG GCAGCGGCTG GAAGCCTATC ATGAAACATC GAACGTCGCG
TCTTGGGACC GTGCGTCGAC GGCTACTCCA ACATTCGCCC CTTCGACATT GCAGAGGAAG
TCTCCAACCA GCCCATACAG TCCTCGGACT CGTACCTCGA CGGCTTCCAC TTCTCCCAGT
GGTAGCTCTG TCGCAACCTC GCCCATCACT GCCGAAGGCA ATCAACCCCG GTGGCGGACG
ATGACCAATC ACCGTGGAGA ACAAAGTTCA CTAACGCAAA AGGATATCCG GCGCTTGAAT
GTGACCGGCC TAGCTGCGTC GACCTTTGAA AGCATTTCCA CCAACGGTTC TTTCGACACA
GCCACAACCT CTCCGCAGCG TAATGTGAGC CCAGACAACA GCTCCATTCT GACACCGTTG
GTGGGATTGG ATTGCCTGAT GACTACCTGC AGTGAAATGG ACGACGAAAA TTCCATCCTT
ACCTTGGAAA ACCGGCAATG TCTCTACCCC TCCTGTCCGT CCTTTCCACA TGAAAGTACA
TTGGCAGGGG ATTCGCCACC ACAACGACAG CACCAAACAT ATTCACTCGA TAGACAAAAA
GGCAGCGAGA GCGGCATTGT AGATCCTGTT GCCGATGGGA CAGATGACTC CATATATACG
CTGGAACACA ATGGAGTTTA TCAACGAGGA ACAGATCAGA ATACGATCAA GCCACGGGTC
AAAAGGAAAG ACAAAGTGTC ACCTAAACGA CCGTCGGCGG CTCGTTCTAC TTCTATCCAG
AATGATGCCG TCAAGACTAC CCCTCGCGAA AAGAAAAAAG GTCGATGTCG GACACTTCCT
GTCGAGATTG CAGGGATGGA AGATGACAAT GAGGACGAGG GCACGTGCAC CATTCTCTTT
GTTCCGACAA CGGAGGACAC AGGCTCAGAC CAAGTTGATC CTCTGTTTTC GTCACATGGA
GAACAATTGT GTTCCATATC ACTGCAGCCT ACGGAAGAAA GAGACTCTTC CCTGAGAGGA
CCGGTCGATT TTGATCGCGT CAGCAAGGCT ACCGTCGTAG ACACAAATTT GCGGAAACCT
AATAAATCAG TCAAGATGCG ATTGACAAGG GAAGATTTGC AACGTCACGA ACGCAAATCG
CTCAAGCAAG CGCTGGCGCA AAAGAAAAAT GCTGGTATAG AAGAAGATAC CCCTATGGAA
GATGACTTTG TTTTGTGGAA GCGCGAAGAG CAAATTAAAA AATTGTACCA GCAGAAGCAA
GGGGATCGCA ACATGCTATT GAAAGATAGA AAATCTTTGA CTTCCAGTCC TAACGCGAAA
GAAAATGGTT CGAAAAAGCG AAGGAAGGAT CGAAGAAAGG ATGGTATCCT TTCGAGAGTT
TTTACTGCGT CGCGCAAAGA ACCAGACCTC GGCGATTTTT CTTTGGCTCC GATGACAGCC
ATGGAACATT TGAAGCTACA CGAAACAGTT GACCAAGCGC CTCCGACACG TGGATTTTTT
CTCTTTCGCA GACGTAGCTC TGGGAATGTA TCCACAACCG CCCAAGCTCT GTTAGAGAAG
GAGCGTTTGG CAGCTAAGGA ACTTCATAGG AAAAAGCTGA ATCGAAAGCA GCAAGACAAC
CACAACGCGA GCAAAACGCA TCGAAATATT GTCCATGAGC AAAAAGTCAA AGCATTGGCA
TTGAGCCCAG CAGCTCCGCG GGTCAACGAG GAAACTCCAA AGCGGAGCGG ACGATCCCAC
ACTGACGCGA GAAAATCATC TGTTGCGAGT CGTAGCCTGC CACGCAATCG TTGACGATAT
CCAGGACGCG CCATACTTCT TACGATCTAT CAACTCTTTC GAGGTCAATA TCAATACAGA
CTTGTGTCCT GTGTCGCGCG TCGTCGCGCA CCCACATTGC CACTTGTTGC ATGCAATTGT
CATTTTGCAA AGACTGTGCA GAAGCGTTGC AAGTTTCAAA GACCTGCCCT GTGTGCTCGG
AAACAAATGT CAGATTTGTT TCTGTGGCGA TCAAAAGGAT TGTATTTATA GGGACGCCGA
GACATAACAG TCCCACTTGC AGCTTTACCC TATTTAAAAG CTACATGTAT AGGTGCAGTT
CTTTAACTCG ATTGTTGCAG TAATCATTTC TCATGTAATG ACCT
|
|---|
| Protein sequence | MKLRLFRKQK SAVSSKQSSS TRSSTQKSLP PTSRETPESP RAKHSSSASA AVSALSSLPP
YDESGKKSSM ILNPRTGGYE APSQVASYED KQLDDDDTLL DASIYTDGYT IEAPSSQKKS
KSALTPRQRL EAYHETSNVA SWDRASTATP TFAPSTLQRK SPTSPYSPRT RTSTASTSPS
GSSVATSPIT AEGNQPRWRT MTNHRGEQSS LTQKDIRRLN VTGLAASTFE SISTNGSFDT
ATTSPQRNVS PDNSSILTPL VGLDCLMTTC SEMDDENSIL TLENRQCLYP SCPSFPHEST
LAGDSPPQRQ HQTYSLDRQK GSESGIVDPV ADGTDDSIYT LEHNGVYQRG TDQNTIKPRV
KRKDKVSPKR PSAARSTSIQ NDAVKTTPRE KKKGRCRTLP VEIAGMEDDN EDEGTCTILF
VPTTEDTGSD QVDPLFSSHG EQLCSISLQP TEERDSSLRG PVDFDRVSKA TVVDTNLRKP
NKSVKMRLTR EDLQRHERKS LKQALAQKKN AGIEEDTPME DDFVLWKREE QIKKLYQQKQ
GDRNMLLKDR KSLTSSPNAK ENGSKKRRKD RRKDGILSRV FTASRKEPDL GDFSLAPMTA
MEHLKLHETV DQAPPTRGFF LFRRRSSGNV STTAQALLEK ERLAAKELHR KKLNRKQQDN
HNASKTHRNI VHEQKVKALA LSPAAPRVNE ETPKRSGRSH TDARKSSVAS RSLPRNR
|
|---|
| |