| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50562 |
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| Symbol | |
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| ID | 7199390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | + |
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| Start bp | 132365 |
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| End bp | 135484 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185489 |
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| Protein GI | 219130684 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGA AACGGAAAGC TTTCTCGCCT CTGCATGCGA ATACGCTGGG ATCCTCCCCT
TCGCAACGGA GCTCCTCGAC ATCCTCATCG TTGCCGCGTT TGGACAAGGA CGACGACTTT
CTGTCGCGTC CACCGAAGAA GCCACAGCCT GTGCGGAGTA GTGATACCAA GACGCCGCGC
ATCAGCAATT GTACGAACCC CCAGGGATTG GTACGTACCA CAACCGCGGT CCCGGCTCCG
TCCACGGCAT CGTTGGGAGC CACATCCCGT ACCAGCCGTC CCTCCAAGGC GCGTTCCAAA
GTACCCCGCC AGACAAAGAG AACCTTGAAG AAACCTCCAC CACCAAGGAT TCAGCAGTCA
AACCAGCCTG CGGACCAAAG TCGAGCAGAT GTGCCCAAAC GTGAAGCACA GGGACCGGGA
GTGATCATTC CTTCGAATCC GCAAACGTCC AAAGATGACA CACAACGACA ATCGCGCCGG
TCCACCTCCA CCCTGGAAAC AATATTGGAA GAAGACTCCT TGTCTTCCAA CGGATCTTAC
GGTCCTCATG GCATATCCAC TATTAAAGCA GCTATCCAAG CGTGTTTACC GAATCCCTCT
TTACCAACAG CAAATCCAAG TCGCCCAATA CCCATCGCAT CTTCGCACCA CGTCATGGAT
CCACAGCATT GCCAAACAAA ATCGCCTCAC TTTCAAAAAC TGAACGCATC ATCGTCGGCT
CGCAACTGCT CGGATGACGA CATGCAGCTT TCCTCGGACG ATGAGACTCT GTCACTGTCG
TCTCCCGAAA CAAGCATACC AAATGTTCCC GACAGGGCTA TCCCCTACCA AAAGGGGACT
TCCCACGCTC TTCATTCTTT TGCTCGGGGC TCAATAGATC ACACAACGAG CCGTCTGAGA
GACGGTAGAG GTCTTCCAAA TGCCACCTTC CAGTCCAATG TCGGCAAGTC GGTGACCAAT
GGTTCCTCAA ACTTTGATGT TGCCACTAAA AATGGGGAGC AACACATTAC GAAAGCATTG
AAGGCTCAGG TGACGGACAA GGCAATGCAG CGCTTTTTGG ACACCCCGGT CGACAATCCG
GACGTTGTCA AGGCCATGCT GGCTAATAGC GACCCATCGC AAGGGCTCAT GGGACTCTCG
CTACAAGTTC AAGCTGGAGA TGATAAATCT TTGGCTCAAA GCGAATTGAC CGATCAGACT
GACTTGGACT CTTTCACGAA CACTCGGCAC GACATTCATG AAGGCTTCGA ATCAGCTGAC
GGCTGGATGG AGCCGCGGAC TTGGACTCGT TTGGCTGCCC GAAACGCGTT ACGAGATCAA
ACTGGGAAGC TATGCGCCGT GCCCGGACGA GCCTTGTTTT CTCCATCTTC CGAGCCGATT
AATGCTGCAT GCAACTCGAC GCCGCACGAG TCTTCGGTAC AATCGGCAAA GCTTTGGACA
GCCAAGGAGG CGAACGATTT TAATCCAGCC CCAATATTTG TTTTACGTGA TGGAAAGCGG
TACCGCCACC CACCCTTGCC ACCGGGATGG ATGATTGGAG TCTCACAGAC CAAGAACCGG
CCCTACTATT ACCACACGGA TTTTGGAACA TCCTTCTCTT GTCCTGTCCA CCTACCTGAT
GACGATGGAC AGGTTTATGG CGATACTCCT TCACCCGTTC CGTCTGCATG TGCAAAGAGT
TGCGCAAGCC TGTATAGTTC TACAGTAGGT CATGACGAAG CTTCAAGAGG AAGGGCGTCG
ACCATATCAT CAAACACTGT CTCTTTGCAA GCATCCAGAA AAAGCAAATT CGCATTAAGT
CCTGTATCAA AAAGGGATGG GCTTACTGTA GTCAGCTGTA GATTGCAAAG TTCCCCTTCC
TTCGAAACAC CGAAAAAGAC AAACGACGCA GTGGAAACCA TTGAATTGGG AGTGTGCGTG
CATAACATCA CAAAAGAGCA TTCCCATATG ACCCCAGCAG TCCATGAAAG TGAATACGTG
TCCGGAAATC CGCTCACTTC TTCTCTTCGA AACAGCAAGG GGCACGAGGC CCATCTAGAA
GAGCATACGG AACAATTGAA ACTAGCCCAG AATCTTATCA GGACGTCCAC AAATAAAATG
TTTAGTCCAC TGTCATTGGC AATGAGGAAG AAGTCCTGGC CTCGGGGTCA GGGATGTGTG
GCCAATGCTC GTATGCCGGA CAACGAATTT GACGCTTCCA GCAGCGAGGA TTCTCGCGTG
CGTTCAGAAA AAGTTTTGTG TTCGACAACG CACAACCCGA CTTCCCATCT TTACTCTCTA
TCATCCCCTC ACGGCACTCA CACCATTGAT CGACGCGACT CCTTGAGGAC AACCGAAAAT
CTGTCGAATT ATGCCACCTC TGGAGCAAAG TTTCCCGAAA CCTACTTGCC TAAAGAAGGC
GTTGACAGAT TCTTCGTCAA CCGGATCTCT GAGGCCCCTG ACAAGACGGT AGACATGAGC
AGTTCTGTTC CCTCAAAATC TTCGTTTACC CTACATTCAT CTCGTTTAAG CAGCCCGAGT
AACGTTGAAG GTGACTCAAG GCAAGGATTG GCTTATGAGA GGGGGAAGGA TAGTGACGAG
ATTCCAGGTG TGGCCAACGA TGACTTCCCA GATGTCGAGT ACGACGAAAG TCCGATCGGA
CTACCCACCA TCGGTGACAG AGATATGACA ATCGGCCTCC GACAGAAGCT AGACTTCACG
TCCACCGACC AAGAATTGGA GGAGATCTTA CCTATTGAAA TGTCTGCAAG CAGGCGATCG
TCAAGACTCC AACCTTTTGT TCTGACATCC ACCGGATCCA AAGACGACGA AATATCCGCG
TTGGGAGTAG ACGATCTCTC CCAACAAAGC AGAGTAGAAG ATTTTATTCA AGAGAGGGGT
GAGATACGGA GCCATAGGTC TTTAGGAGGA TCTGCGTCGA CGTTTGGTAC AAATTTTAGC
CACCGGGTGC GACATCCGCC AATGCCACTG TGCAGTTTAC AGAACGTTGG ACAGCTCGAG
CGATATGCCT CACCGAGTCA CAAACTTTCA AGGAAATCAA GAGACAAACG GGGACGTCGT
AAGTCGAAAG GCGACCTGAG AGTGATCTCG CCGCGAATTT CGGTGATGGT GTCGAACTGA
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| Protein sequence | MTKKRKAFSP LHANTLGSSP SQRSSSTSSS LPRLDKDDDF LSRPPKKPQP VRSSDTKTPR
ISNCTNPQGL VRTTTAVPAP STASLGATSR TSRPSKARSK VPRQTKRTLK KPPPPRIQQS
NQPADQSRAD VPKREAQGPG VIIPSNPQTS KDDTQRQSRR STSTLETILE EDSLSSNGSY
GPHGISTIKA AIQACLPNPS LPTANPSRPI PIASSHHVMD PQHCQTKSPH FQKLNASSSA
RNCSDDDMQL SSDDETLSLS SPETSIPNVP DRAIPYQKGT SHALHSFARG SIDHTTSRLR
DGRGLPNATF QSNVGKSVTN GSSNFDVATK NGEQHITKAL KAQVTDKAMQ RFLDTPVDNP
DVVKAMLANS DPSQGLMGLS LQVQAGDDKS LAQSELTDQT DLDSFTNTRH DIHEGFESAD
GWMEPRTWTR LAARNALRDQ TGKLCAVPGR ALFSPSSEPI NAACNSTPHE SSVQSAKLWT
AKEANDFNPA PIFVLRDGKR YRHPPLPPGW MIGVSQTKNR PYYYHTDFGT SFSCPVHLPD
DDGQVYGDTP SPVPSACAKS CASLYSSTVG HDEASRGRAS TISSNTVSLQ ASRKSKFALS
PVSKRDGLTV VSCRLQSSPS FETPKKTNDA VETIELGVCV HNITKEHSHM TPAVHESEYV
SGNPLTSSLR NSKGHEAHLE EHTEQLKLAQ NLIRTSTNKM FSPLSLAMRK KSWPRGQGCV
ANARMPDNEF DASSSEDSRV RSEKVLCSTT HNPTSHLYSL SSPHGTHTID RRDSLRTTEN
LSNYATSGAK FPETYLPKEG VDRFFVNRIS EAPDKTVDMS SSVPSKSSFT LHSSRLSSPS
NVEGDSRQGL AYERGKDSDE IPGVANDDFP DVEYDESPIG LPTIGDRDMT IGLRQKLDFT
STDQELEEIL PIEMSASRRS SRLQPFVLTS TGSKDDEISA LGVDDLSQQS RVEDFIQERG
EIRSHRSLGG SASTFGTNFS HRVRHPPMPL CSLQNVGQLE RYASPSHKLS RKSRDKRGRR
KSKGDLRVIS PRISVMVSN
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