Gene PHATRDRAFT_50556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50556 
Symbol 
ID7199386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp105287 
End bp106162 
Gene Length876 bp 
Protein Length214 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185485 
Protein GI219130676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CGCTAATCGT GATACGGAGG GTTTTCAATC TTTCCGTGAT CTATTCGTAT ATACCCTTCT 
CCAGTAGACG GACTGCACTT ACGTCGTTGC TACTGCTGTT GAAACGACTT ACTTTGTTGT
ACATGTGGAC GATGGAACGA GCCCATCCTC CCACGTGCGG CGGCGTGAGG GTCCTTCGGT
CACGTACGTG GAGGAGAGCG CGCTCGGCAT CCTTTGCGAT ATCCGTCATC CTCGCCGTCG
TAGTATTCCT CTCCATGCTG TTTTCCACAT CGCACGCGTA CGGCAGGGGA TCCCCGTCAC
GACACGTCGC GTCATCGTCG TCAAGCACTC GTGTGCCTAC GACGGCACCG GACGTTCGAC
ACGTACCTTC GTTCACGACT ACCCGACGAC AAGCGTGTCT GGCTTTCTGG GGCTTCTGTG
GTGCGGCTGT GGTTGTTCCA CCCGGAAACG CCGCCTACGT ACTCAACGAC GACAGTGGTG
AATACGAACA AGTTGAGGAT CAGGATTGGC AGACGACCTG GAAGGAACGA TTGGATAAGG
CCAGTACCAT GTCCCCGGAT CAGGTATTTC TCGCCGCCAA GGGCGCCGGT AACGTCGATT
TGAAACAGGG ACCGGAAACG GACGTCAGCA AAAAGCGACG CGCCATGGCG GGTTGTCGTG
ACAAGACACT CCGCCAAAAG GCGGGTTTGT CGGAAGAAAA AGCCTGCAAC GCCCGAGTCT
TGCAAGGGGA TTTCGACTTT ATGATTCAAG CCATGGATGG CAACTAACAG GCATGTCCTG
ATATTTTGCT AGTTCCAGCT CTAGCGTTTT TCGTACTGTT CCGGTGCCCG TCCAAAGGTA
CAATTCACAA AGCCGGAACA GCCTTTGTAG TTCGAT
 
Protein sequence
MWTMERAHPP TCGGVRVLRS RTWRRARSAS FAISVILAVV VFLSMLFSTS HAYGRGSPSR 
HVASSSSSTR VPTTAPDVRH VPSFTTTRRQ ACLAFWGFCG AAVVVPPGNA AYVLNDDSGE
YEQVEDQDWQ TTWKERLDKA STMSPDQVFL AAKGAGNVDL KQGPETDVSK KRRAMAGCRD
KTLRQKAGLS EEKACNARVL QGDFDFMIQA MDGN