Gene PHATRDRAFT_50545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50545 
Symbol 
ID7199347 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand- 
Start bp74640 
End bp75326 
Gene Length687 bp 
Protein Length202 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185515 
Protein GI219130738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.748479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCTC CGTTCACAAC CGCCGCGGCG CTGATCCTCA CCAGTCTCTG GTCCACTACT 
CGCTACTACG GCGAGGCCTA TTCCGTCCCC TTTTTCGCCA CACGCCGGTC TGCGCTCACC 
ATGAAACGCG GTCGCGGGAG TCTCGGACGT GAAGTCGGTG GGCGTCCGTC ACCCGCCAAC 
AACAGCAACA ACAGCAACGG GACCGAGTTT GGGCTCGTCA CTCAACTGGT GTCCCATCCC 
GGCTGGACAA ACCTTACCCA CTACCGAAGG CAAGGTCGGG TTCCTCGATA CCAACCTACC 
CACCATGAAG AACGGCAACA CCAATCCGAC CGGAGCGGTG GCCGCCGTCC GCTACGACGA 
CAACATCTAC TGCTTCGCCA GTGCCTGTCC TTCCTGTCAG GTACCCCTCT CCAAGGCCAA 
GATACTCCCC GCCAACGAAG AAACGAAACA GCGGGCGCCG CGATTGACGT GTGACTTTTG 
CAAAGCCACG TACAGTTTGG GTGACGGATC CAAACTGCAA ACGACCGAAT CGGGAGGTAT 
TCTCGGTGGC GTCGTCAAGT CCATTTTTGC TTCGCAAAGT TCCGGGCCAC TCAAACTTTA 
CAAGTTGGGA GAGCAAAAGG GAAAACTGTT GATTGTCGTA GATTAGTGAC AACCACGATG 
ACATACCGAG TAGTAATATT GGTACTA
 
Protein sequence
MHSPFTTAAA LILTSLWSTT RYYGEAYSVP FFATRRSALT MKRGRGSLGR EVATGPSLGS 
SLNWCPIPAG QTLPTTEGKV GFLDTNLPTM KNGNTNPTGA VAAVRYDDNI YCFASACPSC 
QVPLSKAKIL PANEETKQRA PRLTCDFCKA TYSLGDGSKL QTTESGGILG GVVKSIFASQ 
SSGPLKLYKL GEQKGKLLIV VD