Gene PHATRDRAFT_50544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50544 
Symbol 
ID7199378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp72313 
End bp73343 
Gene Length1031 bp 
Protein Length312 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185514 
Protein GI219130736 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.965292 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TGACAGTGAT TTTGTGGCGC TACGGGTGCA TTTTATAGAT AACCTGGATC GCTTTCTTTT 
AGTTCTTTTC AACATTTTTC AAAGCCTTTA CCATGGCACG AGGAGCTCAA GCCAAGCTGC
GGCGTCGAAA CCGCAAAGGG GACGATGAGG AAGCAGTGAT TGACATGTTT GGTCCCAAAC
AAGGCGGCGC CGAAGCCACA GGAACGAGCG ATTTCGACGA AATTCCCATG CCACCTGGAC
TCGCGAGCGG TACCACGTCC GAATCTCCCG TCGAAGCTGA CAACAGCGAA GAAGAATCAA
ACCTGCCCAA AAAGAAGAAG AAAAAGAGTA AGCCGACGGC AAAAGAGCCG CTGGCCGGTA
CAGCCAGTAG CGCCGGTAGC ACCAATGGCA TTAAGCGTAC CCCACTGATC CTACTCATTC
TCATGACGGG AACCACCCTT TTACCCGCCT TCATCTATGC TGGTGACTAC TTGAGTACCT
TTATGGCCAA GAATCATATC ATGGGACAAA TTGGTTTCCG GATGGGCGTG GGCGCCGTTC
CTCGCAAACG TGTCGTTTCC TTCTACGAAA AACACTCACC GGAAAAGCTA GAAGAGGTAC
CTAATATTCT TTCCAAGCAC TATGGTGACT ATCCCAAGCT TATTCGAAAG CTCGAACGCA
AATACCAAGA TTACGGGTAT TTTTTGGGTT GGGAAGAAGA CGAGGCCCCT ATGCGCTTGG
CGCTGGATCA GGTTCACGCA ATGTACGAAA CGTGGGTAAC CGACTACTGG AATCGTTACG
CACCGCAGCC CCTCAAGACG GCGGCCCGAA ATATGCGGTA CAATTTCAGC TTTCTCTACA
AAAAGCTGCG CAAAGCCTGG AAGAAGCAGG TGTGGCCGCA TCTGGAGCCG TTTTTGGGCG
TGCCCGACAA GCGAGCGGCG GAGAAACAAA AGCGCAAAGA TGCGGCTGAC GCCCGGAAGC
GCCGTGCGGG ATCGTCAGCA GGTACAAGAA GAAAGAACAC TGACTATCGG GATGATGTGG
AAGAAGATTG A
 
Protein sequence
MARGAQAKLR RRNRKGDDEE AVIDMFGPKQ GGAEATGTSD FDEIPMPPGL ASGTTSESPV 
EADNSEEESN LPKKKKKKSK PTAKEPLAGT ASSAGSTNGI KRTPLILLIL MTGTTLLPAF
IYAGDYLSTF MAKNHIMGQI GFRMGVGAVP RKRVVSFYEK HSPEKLEEVP NILSKHYGDY
PKLIRKLERK YQDYGYFLGW EEDEAPMRLA LDQVHAMYET WVTDYWNRYA PQPLKTAARN
MRYNFSFLYK KLRKAWKKQV WPHLEPFLGV PDKRAAEKQK RKDAADARKR RAGSSAGTRR
KNTDYRDDVE ED