| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50527 |
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| Symbol | |
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| ID | 7199371 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | + |
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| Start bp | 4810 |
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| End bp | 6472 |
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| Gene Length | 1663 bp |
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| Protein Length | 467 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185469 |
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| Protein GI | 219130642 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0147272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAGA GGCGGCCGAG TGCTGGTGCT GTTGCAATCG AGCAACATCC AATATTCCCG
TGTGACGGCC AGATGCAAAG TAAGAGCGGT AAAGAGGTAA ACTAAGATTT GCAATTTTCG
TTGCGCGTAC TTATTTATAT TTTTATCTGG CCGCCACTCG GTTTTGCTTG CCATTGCCAT
CCAAAGTAAG CCTACCGCTT GCGTCGTTTC TCCAGTTGCC TGCGTTGTGT CGGTTTCAGC
TCTCACCATC TCACATCTTG CATTTGTTCT TTCTAAGCCT GCCAGCAAGG AGGGCGCATG
AGCAATTTTC TTCTGGTTAG AGTATAACAC AATGATAGAG ACTAAGGCAA ACGATGAGGT
GAACATGGCC ATGGCGGTTC TTGCCTTTTT GCAAAGTCAG AAGTACGCGA AAACCGCAGC
TAGCTTTCGG AAAGAACTAT CAGCCAAGGG TATTGACGTC GGTGGCAAAG TAGTCTTGCG
GAAACTCACA TGGGAGGCAG TCGAAAGTCA CGAAGCCTCT GGCAGTGAAG ATTCTGACGA
GGCGAAACCG GAAGAGAAAA TAGAGATGCA CAGAGCGACG CAGAGGGCGG GAGATAGAAA
TAGTTCGGAA TCATCAGACT CATCTTCTTC ATCGGAGTCG GAGGAAGTTG AAGCGAGCAC
CAAGACCCCT GCTAGCAAAA TGCAAGCCTC TAGTAAAAAA TCTATCGGTA CATCTTCCTC
ATCCTCCTCT GACAGCGAAT CGAGTACCGA TGATTCCAAA AGCACTGTGA AAAAACCAGA
CTCCCTTGCA AAATCTCATC CTGAGAAATC TTCGGATAAC TGTTCATCGG AATCTGATTC
AAGTTCTAGT AGTGATAGCG AATCAAGCGA TGATGATGAT GCTCCCCGTA TCTCTAAGAA
AATTGCTGTC ACGACAAAGA AAGCAAAAGG CAAGGCAGGG TCGTCGCCGC AGGAGATGGC
AGACTCGTCT ACAAAGAGCA AGCGCCGAAC AAAGACTGAA ATTGCTATTT CAAAAAGCAG
TGACGTCGAC CCTTCGTCGA GTTCCGAGGA TGAAGCGCCG CCTCCAACGA AGAAGGTTCG
TCTTGAGGCA AAAGCTGGAG TCGTTTCGCC GGAAGATAGC GACTCGAACG TCAGTGATGT
TGAAGTTTCA GACGTTTCGT CGGTAGAAGT GTCATCCTCC GACGGTAGTG ACTCAGACTC
ATCGAGCTCC GACGAAGAAT CCGAAGACGA AAACGATATA CAAGAACGTA TAAAACTTAA
GCGTCGGGAT GCCGCGAAAA AGGCTCAAGA AGCCGCAAAG GCTGCGCACG AATGGAGACC
ATCCGCTGAA AAGAAAAAGG TAGAGATTAA GGCTGCCGCC GGGACGGATG GCGCGCAAGC
ATTATCGAAA GGAAAGCCCT TTCAGCGTGT TGACTCCGAG TTTTGGGGGC GTGTTGCAGT
CAAAGACGGC GGTGCTATGG CTGATAATTC GTACGAAGGT TTGTTTGGTG ACAACGGCTA
TGGTGCACAG TCTAGTGCAA AGCTATTGAC TGTAAGAGGG AAAAATTTTA CCAAGGAAAA
GAACAAAAGA AAGAGAAGCT TCAATGGGCT GTCGCGCACA GGTGGACAAA TTGACACGGA
GCGGAGCTAT TCAACCAAGT ACCAATATTC TGATGACGAA TAG
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| Protein sequence | MAKRRPSAGA VAIEQHPIFP CDGQMQKTKA NDEVNMAMAV LAFLQSQKYA KTAASFRKEL
SAKGIDVGGK VVLRKLTWEA VESHEASGSE DSDEAKPEEK IEMHRATQRA GDRNSSESSD
SSSSSESEEV EASTKTPASK MQASSKKSIG TSSSSSSDSE SSTDDSKSTV KKPDSLAKSH
PEKSSDNCSS ESDSSSSSDS ESSDDDDAPR ISKKIAVTTK KAKGKAGSSP QEMADSSTKS
KRRTKTEIAI SKSSDVDPSS SSEDEAPPPT KKVRLEAKAG VVSPEDSDSN VSDVEVSDVS
SVEVSSSDGS DSDSSSSDEE SEDENDIQER IKLKRRDAAK KAQEAAKAAH EWRPSAEKKK
VEIKAAAGTD GAQALSKGKP FQRVDSEFWG RVAVKDGGAM ADNSYEGLFG DNGYGAQSSA
KLLTVRGKNF TKEKNKRKRS FNGLSRTGGQ IDTERSYSTK YQYSDDE
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