| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50525 |
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| Symbol | |
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| ID | 7199411 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011699 |
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| Strand | - |
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| Start bp | 1369 |
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| End bp | 3736 |
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| Gene Length | 2368 bp |
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| Protein Length | 688 aa |
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| Translation table | |
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| GC content | 47% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185505 |
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| Protein GI | 219130717 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.196683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCTTTGTCCA TGATAAAAAG GTCGGCTCAT ACTACTGGTC TGAGTTCTCA TTAAACGCAC
GGAACATATC ATCATTACAG CAAGCTCCAT ACATCTCAAG TAAAATAAGC ATGACGGATA
TGATTTCCAA AGGCCCGTCT CTCGTGTTTG GTGCTTCGGG CGAACAAGGC CGAGTTGTTG
TTGAAGGTTT AGTCGACACA GGCTACTCTC CAGTATATGC GTTCACACGT TTAAAGCACG
ATACCTATTT GACAGACGCA ATCGGGGCCA AGCTGATTAC AGGTGATTTG GAAAATCCTG
ATGACGTCCG CATCGCCCTG AGGCAAACAC GAGCGCAGAC TGTCTACCTC GTGACGACTA
CCGCCTTACC CACGGAAATT GGCCAAACAA CAGGATTTTC CGCCGCTGCC ACTGCAGAAT
TTCAAGCCAT TGTCAACTTT TTTCATCTCT TAAAAGCAGT GTACGATGAA GACAAATTAC
CTCGTCATGT GGTGCTTTCC ACTCGGGACA ACGTTCAAGA AGTCACGCGC AAGAATTTCG
AGGAAACAGG AGATATCTGG ATTGATCCAT TGGACGACGG TAGTATTGTT CCCCATTATA
GTGCCAAGGG AAAGGGTGCT CAGTACGCGC TTAAGTACTT AGATGACATT GGGGATCTTA
AACTTACTTG CCTCGCTTTA CCGTTCATGT ATTCCAATTT CTTGGGATTC TTTTGTCCCC
TTCCAAACGA AGGGCGCACT CAATGGGTTC TCTCGGCCTC ACTTGGCGAA GGCAAAGTAG
ACATGATGGG AAGTGCCGAT CTCGCTGCGA TTGTTCGTAA GTACCTGTGG TCGCATTGAA
TCTGGAATTG GGCACTCTTC GCTAACAACC AGACATTCAC TTATATTGTC GTTGACAGCC
AACATCTTTG CGAATTCCGA CAAGTACGAC GGCGAGATCA TTCGTCTTGT TGGCGAACGT
CTCACAATCG ATGAAGTGGC AGGGGCTTTT GCAGATTTGT TTGGCAAAGA TGTCATTTAT
AACCCGCTTA CGCCTGCCGA GGTAGCGGCA CTTCCTTTTG CCGCGGCTCC GGCAATGGCA
CAAATGTGTC AATTTTTGGG CGATCCCCGA TCCTTGCAGC ACGATTTGGA AGTGAGCAAA
GAAGTCGCTT TTCCGAAGCA ACTCCAGCGA TTTGAAGACT GGTTACTTAC ACATTCAGAC
TCGACGGCGT TTACGCAGGT TGGATTGGAC GTAGATGCGC CTGACATAGA ATCTGTCACA
GTCTTTGGCG CGACCAGTTC AGAAGGAGTG TCGGTTGTCA AGGGGCTTCT GGCTGATACA
CGCAAGTCGT ACCGCATTCG CGCCACGACA CGTCATTTGG ACTCAGAAAA GGCCAAAGCT
CTGCAGAAGC TGGACCCGTC TCGTATCGAT TTAGTGTATG CAGACTTCGA CGATATTGAC
TCCTGTCGTG CCGCTCTGGC TGGTGAATTC TCACAAGGTG TCTTTCTAGC CACAGATTTT
TACGAAGACG CGGCGCAGGA CATGGAAGCC GAAGAACAGC ACGCCAAAAA TGTTATAGAT
GCCTGCGAAG CTGCCAAGAA CGTGAAGCAC GTGGTCTTCT CGACAATGGA GTCGGTAGAA
GAAATGAATC AAAAACTAAA TCTCGGATTA CCAAAAGTTA TCGACAACAA AGGGAAAGAA
GGAACAATTG TGCAGTTTGA TGCAAAGGCT CGAGCGGCGG CCTACGCGCG CACTAAGAAG
ATTTCGGTAA CTTATGTTTT GATGCCGTGC TATTCTGAGG TCTTTTTCGA TATGATCGAG
AAACGCATCG AACAAGGGAA GGAGAAGCTG GTTTTGACTA TTCCTCTGAA AAACGATGCG
AAGGTCATGT GTATGAGTGT TGACGAGCTT GGCCCTGCGG TAGCCAACAT TTTCGATAGT
TACCAAGTTT ATGCAGGCCA TGAAATCGGC CTTGTTACCG ACTTCGTTTC TGTTGCAGAA
GTCAAGGATT TGATCGCGGA AATTTTCCTC GCCAATGAGA AAGATGCAAT GACACTAGAA
ACTGAGGAAG TATCATCCGA CGATTGGATA GAGGCCAAAG ATACTTATAT GAAGGATTTG
GGACAAATGT TTGCTTACAT GTCTCATTCG GATGCTGTCA AAATGCGCCG ATCAATTGCA
AAGACAATGA AGCTTGTCCC AGAAGCTCGT GCGCTCCGAC AATGGGTCGA ACAGAACCGA
GAGAATGTAG CTTTCCGCGA AAAGCTTGGT CTCCGCTGAT ACAGCCGTGT CAAGCTTCAT
GAAAGACCCT CTAGGATGGA GAAGTTCAAA CTGAAAGGAA TGGATGCATA TTCTTCACAT
AAATGTTAAT GAAGCAAGTT ACAGTTTC
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| Protein sequence | MTDMISKGPS LVFGASGEQG RVVVEGLVDT GYSPVYAFTR LKHDTYLTDA IGAKLITGDL
ENPDDVRIAL RQTRAQTVYL VTTTALPTEI GQTTGFSAAA TAEFQAIVNF FHLLKAVYDE
DKLPRHVVLS TRDNVQEVTR KNFEETGDIW IDPLDDGSIV PHYSAKGKGA QYALKYLDDI
GDLKLTCLAL PFMYSNFLGF FCPLPNEGRT QWVLSASLGE GKVDMMGSAD LAAIVPNIFA
NSDKYDGEII RLVGERLTID EVAGAFADLF GKDVIYNPLT PAEVAALPFA AAPAMAQMCQ
FLGDPRSLQH DLEVSKEVAF PKQLQRFEDW LLTHSDSTAF TQVGLDVDAP DIESVTVFGA
TSSEGVSVVK GLLADTRKSY RIRATTRHLD SEKAKALQKL DPSRIDLVYA DFDDIDSCRA
ALAGEFSQGV FLATDFYEDA AQDMEAEEQH AKNVIDACEA AKNVKHVVFS TMESVEEMNQ
KLNLGLPKVI DNKGKEGTIV QFDAKARAAA YARTKKISVT YVLMPCYSEV FFDMIEKRIE
QGKEKLVLTI PLKNDAKVMC MSVDELGPAV ANIFDSYQVY AGHEIGLVTD FVSVAEVKDL
IAEIFLANEK DAMTLETEEV SSDDWIEAKD TYMKDLGQMF AYMSHSDAVK MRRSIAKTMK
LVPEARALRQ WVEQNRENVA FREKLGLR
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