Gene PHATRDRAFT_41575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41575 
Symbol 
ID7199408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp216544 
End bp217032 
Gene Length489 bp 
Protein Length162 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185499 
Protein GI219130705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTGA GGGATCCTAG GCTTGAAATT GGAGGGAAGG TGACGGCAAA GGCTTGTCAT 
GTTGTGCATC TGAGCGAGTG TGCACGGAGA TATGGCACCA ACAAACACAC CAAGCGACTT
GTTGGAACGG TTGTAGATGT CATGACCACC CCTGTATCCC TTTCAACCGG GCGTACCTCT
ACTTTGATAA CAGCAGCTTA TGATTTTGGA GAGGATTTGT TCAAGGAAAA CACACTGAAC
ATTCGGAGTG TAAAGGCATT TGTACTGCCA GAAATGTCCT TAATTGAGGA AGTAGCAGCA
GAGGCTTTGC GGGCAGCAGA AGCAGACTTT GACGCCGGAA ACTTGATGGA AGAAATGGTC
GAAGCCCCAG TAGCCGAAAT GGTTGATCCC CTGGCTGGCA CAGAGCCCGA TACCTTGGTC
GACACAGAGC CCGATACCCC GGTTGACACA GAGCCTGATA GCCCTAAGGG GAGGGAGATC
CCAGAGTAG
 
Protein sequence
MPVRDPRLEI GGKVTAKACH VVHLSECARR YGTNKHTKRL VGTVVDVMTT PVSLSTGRTS 
TLITAAYDFG EDLFKENTLN IRSVKAFVLP EMSLIEEVAA EALRAAEADF DAGNLMEEMV
EAPVAEMVDP LAGTEPDTLV DTEPDTPVDT EPDSPKGREI PE