Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41555 |
Symbol | |
ID | 7199395 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011699 |
Strand | + |
Start bp | 155118 |
End bp | 156262 |
Gene Length | 1145 bp |
Protein Length | 350 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185493 |
Protein GI | 219130693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCA GAGAGTACGG AGAAGGACGT AGACGCTGCT CACCGACCAA CTGGGCGCTG GTCGAGGCGG ACAGTATGAA CAGTGTTCTC CAGGATGATA ACAAAGACGA CGACACATCA GCGAGCGAAA ATATTCAAGG ATTCAAAAGC GAATGGAGAC AATCTTGTGG TGGCGAGCGG TACTCTGGTA GCGCTGTAAG CCGTGATGCC TTTAGCATGC CAAGTGTCTT GCTGGGGAGC GATCAAGACC CAACCAGCGC GCTGGCGTTG GATCTGGATC AACCCTGGCA GCGATCGCTT TTAAGAGAGC TCGAAAACAC TGACACTATT CATAAACGGC CATTTCGATC GGATCGGATG ATGCTTGGTC ACGCCAACTC TGGAGACTTC GCTCTGCCGA TCGACGATGA TTTTTCGGTT GAGACTGACA CGAGTTCTAC GATTCCTACC CGAGGTCAAG TCATTCACCG TGTGCTGCCG AGTCATGAAA AAGAATGTTT TGCAGCGAGG AAGACAATCA CGTTGAAGGA ACTATATGTC ATGAAGGGAA GAAGACGCAA ACGTTGTGCG GTTCTTCGAT CCCGTCCCCG CGGACTCTTC AGGAGGAGCA CGACATGTCC TCGAATCACT GGGCGGACAC CCCTATCGAC CCGGAAGAAT ATAGTGGTGA ATGGCACTGC ACACCGATGC ATCCACCGTA TGCCTTTCAA AACGACAATA CTACCGAGGT CAGTCTCCGA CCGACTCCTA AGAAAGGTCC TGTCGGACGT AGAGGGTCCA CGCATGATCT CCACTACCTG CAACGGGTCT CCGCCTTTGG CGACGAGCCG CAGCCGTTCC AACCGCGATG GGTAGGGCTG GAAGATGACG TCCTGACGGT GGAAACTAGT CAAAACGAAG CAAACTGTAT GTGTTGGGGT ACAGGAATTC TCGACTTTTT GCTACCGCCA CGACAGAACG GCGCACCCTT CCGGGGCCGA AAACGTAGGA CCTATGTTTC GCCCCGTCCT CAACTTTCGG TGGTAAATGA AGTTGTCGAG GATATCATGG AAACTGCTTC GAAAGCTTCA ATAAGCCGCA TGCGCGAAGA GCCGACAGGC ACCTATCGAG ACGATCAATT CTTTTACGGT GGTATCTGTC GTTAG
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Protein sequence | MDRREYGEGR RRCSPTNWAL VEADSMNSVL QDDNKDDDTS ASENIQGFKS EWRQSCGGER YSGSAVSRDA FSMPSVLLGS DQDPTSALAL DLDQPWQRSL LRELENTDTI HKRPFRSDRM MLGHANSGDF ALPIDDDFSV ETDTSSTIPT RGKKTQTLCG SSIPSPRTLQ EEHDMSSNHW ADTPIDPEEY SGEWHCTPMH PPYAFQNDNT TEVSLRPTPK KGPVGRRGST HDLHYLQRVS AFGDEPQPFQ PRWVGLEDDV LTVETSQNEA NCMCWGTGIL DFLLPPRQNG APFRGRKRRT YVSPRPQLSV VNEVVEDIME TASKASISRM REEPTGTYRD DQFFYGGICR
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