Gene PHATRDRAFT_41555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41555 
Symbol 
ID7199395 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp155118 
End bp156262 
Gene Length1145 bp 
Protein Length350 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185493 
Protein GI219130693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGCA GAGAGTACGG AGAAGGACGT AGACGCTGCT CACCGACCAA CTGGGCGCTG 
GTCGAGGCGG ACAGTATGAA CAGTGTTCTC CAGGATGATA ACAAAGACGA CGACACATCA
GCGAGCGAAA ATATTCAAGG ATTCAAAAGC GAATGGAGAC AATCTTGTGG TGGCGAGCGG
TACTCTGGTA GCGCTGTAAG CCGTGATGCC TTTAGCATGC CAAGTGTCTT GCTGGGGAGC
GATCAAGACC CAACCAGCGC GCTGGCGTTG GATCTGGATC AACCCTGGCA GCGATCGCTT
TTAAGAGAGC TCGAAAACAC TGACACTATT CATAAACGGC CATTTCGATC GGATCGGATG
ATGCTTGGTC ACGCCAACTC TGGAGACTTC GCTCTGCCGA TCGACGATGA TTTTTCGGTT
GAGACTGACA CGAGTTCTAC GATTCCTACC CGAGGTCAAG TCATTCACCG TGTGCTGCCG
AGTCATGAAA AAGAATGTTT TGCAGCGAGG AAGACAATCA CGTTGAAGGA ACTATATGTC
ATGAAGGGAA GAAGACGCAA ACGTTGTGCG GTTCTTCGAT CCCGTCCCCG CGGACTCTTC
AGGAGGAGCA CGACATGTCC TCGAATCACT GGGCGGACAC CCCTATCGAC CCGGAAGAAT
ATAGTGGTGA ATGGCACTGC ACACCGATGC ATCCACCGTA TGCCTTTCAA AACGACAATA
CTACCGAGGT CAGTCTCCGA CCGACTCCTA AGAAAGGTCC TGTCGGACGT AGAGGGTCCA
CGCATGATCT CCACTACCTG CAACGGGTCT CCGCCTTTGG CGACGAGCCG CAGCCGTTCC
AACCGCGATG GGTAGGGCTG GAAGATGACG TCCTGACGGT GGAAACTAGT CAAAACGAAG
CAAACTGTAT GTGTTGGGGT ACAGGAATTC TCGACTTTTT GCTACCGCCA CGACAGAACG
GCGCACCCTT CCGGGGCCGA AAACGTAGGA CCTATGTTTC GCCCCGTCCT CAACTTTCGG
TGGTAAATGA AGTTGTCGAG GATATCATGG AAACTGCTTC GAAAGCTTCA ATAAGCCGCA
TGCGCGAAGA GCCGACAGGC ACCTATCGAG ACGATCAATT CTTTTACGGT GGTATCTGTC
GTTAG
 
Protein sequence
MDRREYGEGR RRCSPTNWAL VEADSMNSVL QDDNKDDDTS ASENIQGFKS EWRQSCGGER 
YSGSAVSRDA FSMPSVLLGS DQDPTSALAL DLDQPWQRSL LRELENTDTI HKRPFRSDRM
MLGHANSGDF ALPIDDDFSV ETDTSSTIPT RGKKTQTLCG SSIPSPRTLQ EEHDMSSNHW
ADTPIDPEEY SGEWHCTPMH PPYAFQNDNT TEVSLRPTPK KGPVGRRGST HDLHYLQRVS
AFGDEPQPFQ PRWVGLEDDV LTVETSQNEA NCMCWGTGIL DFLLPPRQNG APFRGRKRRT
YVSPRPQLSV VNEVVEDIME TASKASISRM REEPTGTYRD DQFFYGGICR