Gene PHATRDRAFT_41504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41504 
Symbol 
ID7199338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011699 
Strand
Start bp14713 
End bp15168 
Gene Length456 bp 
Protein Length151 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185508 
Protein GI219130724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000401457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTCA ATCCAATTGC AACGACACTC ATGCCTCTGT CCCAAGCTGT TTCTTGGTAC 
CTTGTCCTTA ATCAACCCCT TCTGCCTTCG CTTTCCAAAA TCTCGACCTT TTACTGTGCC
TGGGCTCTCT ACAAAAAAAT CGCCAAAGGC GATCAGAAAG AGCTAGGTCA CATTAGTATG
GGTATTCTGG CGGTGACTTC CTATTCCGGC AAGCGGTATG CTTCTCTAGC AGGCACGGTG
CTCGTCTTGG CGAATTTTCT TCTCCCGGCA TACTACGTCT TGTCATGGAG CGTGGAGAAG
GTGGCAGAGA AACTCAAAAA GGATGTCACC AATAAAACAA TCAAATGGGC TTACATCTTC
AAGGCCTATT TTGTAAGCAA CCTGGCTCTG TGGGGAATGG TGTGCTACAA ACTTAGTCAG
GGTGAACTTT TACCAGGAGA AGTTGTTGCG ACATGA
 
Protein sequence
MSVNPIATTL MPLSQAVSWY LVLNQPLLPS LSKISTFYCA WALYKKIAKG DQKELGHISM 
GILAVTSYSG KRYASLAGTV LVLANFLLPA YYVLSWSVEK VAEKLKKDVT NKTIKWAYIF
KAYFVSNLAL WGMVCYKLSQ GELLPGEVVA T