Gene PHATRDRAFT_24195 details

Gene Information

• Locus tag: PHATRDRAFT_24195
• ID: 7199350
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011699
• Strand: -
• Start bp: 96119
• End bp: 101909
• Gene Length: 5791 bp
• Protein Length: 1463 aa
• GC content: 52%
• Product: CPS III, carbamoyl-phosphate synthase mitochindrial precursor
• Protein accession: XP_002185520
• Protein GI: 219130749

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGCGCGTC TTCATTTGGA AGACGGTACA ACCATGACGG GTCGCTCCTT TGGTTGTCAT 
GAATCTGTCG AGGGTGAAGT ACGTACGAAT GATGGGTCCG TCGCCGAACG ATTGGCCGCC 
GGTGTAGCGT CTCACATTGT AGACTTGGTC CACGTTTTAC TCTCGCACAG GTTGTGTTCG 
CTACGGGAAT GGTCGGATAT CCCGAAAGCT TGACCGATCC GTCCTATCAA GGACAGATTC 
TCACCGTAAC AACGCCCATG GTGGGAAACT ACGGTGTGCC CGATCGCAAG GCCGTCGACG 
AGTTGGGTCT GCCCGCGTAC TTTGAATCCT CGCGCATTCA TGCTACCGGT TTGATTGTTC 
AAGATTACAG TCACCATTAC TCGCACTGGA AGGCAGCCAG TAGTCTCGGT GACTGGCTCA 
AGGAGGAAGG AATCCCTGGT CTCTCCGACA TTGATACTCG TATGTTGACC AAGAAAATTC 
GTGAAAAGGG AGCCATGCTG GCTCGGATTG AAGTGGATCT CGACGCCCCC GTGCCAGATT 
TCGGCAAAAT GGTCGACCCC AACGCGCGTC ACCTTGTCAA CGAAGTTAGT ACCAAGGAAG 
TAAAGGTCTA CGGAAAGGGC AATCCGACCA AGGTTATCGC CGTCGACGGT GGGATGAAGT 
TCAACATTAT TCGTCAGCTC TGCAAGCGTG GCGTAGAACT CACCGTCGTA CCCTGGGACT 
ACCCCTTTGC TTCCGAAATG CACAAGTACG ATGGTCTTTT CTTGAGTAAT GGTCCCGGTG 
ATCCTGTCAT GTGCGATGTG ACCATCAAGG AACTTGAAAA AGTCATTTCT GTCCCGGACA 
GTGAAGTCAA ACCCATTTTT GGCATCTGTC TCGGTAACCA GTTGATGGGT ATCGCCGCCG 
GAGGTATCGC CAAGAAGCTT CCCTTTGGTA ACCGAGGTCA GAATCAGCCG GTTCTCAACC 
ATCAAACAGG CGAATGCTAC ATTACGCCGC AAAATCACGG ATTCCACATT GACTGCGCCA 
CTCTCAAGCC GGGATGGAAA ACGCTGTTCA CCAACGCCAA CGACGGATCC AACGAAGGTA 
TCGCTCACGA GACTCGTCCC TACTTCACCG CGCAGTTCCA TCCGGAAGCC TCGTCTGGTC 
CCACCGACAC GGAGTTCATG TTCGATACCT TTCTCGAAGC GTGCAAAAAG CCCATGGACA 
AGATCCGATT CCCAGTCCGC AAACCCGCTC CACCTCGCTC CAACGCCAAG AAAGTCTTGT 
TGCTCGGATC GGGTGGTACC TCCATCGGCC AGGCTGGTGA ATTCGACTAT TCCGGCGGAC 
AAGCCATTAA GGCCCTAAAG GAGGAAGGCT TGGAAGTGGT CCTCATGAAC CCGAACATTG 
CCTCGGTACA GACCAATACG GATGACAAGT CCGCCAGTAA GGCTGACCAT GTTTTCTTTT 
TGCCCGTCAC CCCTGAATTT GTCGAAGAAG TCATCAAGAA GGAAAAGCCG GATGGTGTCA 
TCATATCCAT GGGAGGACAA ACGGCCTTGA ACTGCGCCGT CCAAATGTAA GTTCAGACGA 
GTTTGTTTTT TGAGATTTTT CACAAGATAG GAACTCACAC AACTGCCAAC ATTAATTGGA 
CCTGCTGCAG GCACGAAAGC GGAACTTTCG AAAAATATGG TGTCAAAATT CTTGGTACGC 
AGATTCCAGC GGTCATCAAC ACCGAAGATC GTCAGCTCTT TTCGGATCGC CTCAACGAAA 
TTAATGAAAA GATTGCCGAG TCGTACACGG CCCAAACTAT CCCAGAGGCG GTGGAACATG 
CCAAAAAGGT TGGCTACCCG CTCATGATCC GTTCCGCCTT TGCCCTGGGA GGACTCGGTA 
GCGGCATCTG CGTTGACGAA GATCACTTGA AAGACATGGC CAAGAAGGCT CTTTCTGTTT 
CACCCCAGAT TCTGGTCGAG AAGAGCATGA AGGGATGGAA AGAAGTTGAG TACGAGGTTG 
TTCGTGATAC GCACGACAAC TGTGTCACTG TTTGCAACAT GGAGAACTTT GATCCACTTG 
GTATCCACAC CGGTGATAGT ATTGTCATGG CTCCCTCGCA GACTCTGAGC AACGAGGAAT 
ACCACATGCT CCGTGAGACT GCTATCAAGG TCGTTCGCCA CTTGGGAATT GTGGGGGAAT 
GCAACATTCA GTACGCTCTT CACCCGGAAT CGCTCGAGTA CGCCATTATT GAGGTCAACG 
CGCGTCTTTC TCGTTCTTCA GCTTTGGCGT CCAAGGCTAC AGGATATCCC TTGGCTTTCG 
TTGCCGCTAA GTTATGCTTG GGTATTCCTT TGACAGAAGT TGTCAACTCT GTCACCAAGA 
AGACACAAGC TGCTTTTGAG CCTTCGTTGG ATTATATTGT CACCAAGATT CCTCGTTGGG 
ACATGTCTAA GTTTGAAGGC GTCAGTACCG AGATTGGATC CGCTATGAAG AGTGTCGGCG 
AAGTCATGGG CATTGGACGG ACCTTGGAAG AGTCTTTGCA AAAAGCGTTG CGCATGGTGG 
ACCCTTCGGT TGCTGGCTTC CAACCTAAAA ATCGTTTCGA GACCATGGCG GCCTTGCGCA 
AAGAATTGGA GGTGCCTACC GATAAGCGCA TCTTTGCGAT TGCCCAGGCT TTGCATGAGA 
AGACGATGAC GGTCCAGGAG ATCCACGACA TCACCAAGAT TGATCATTGG TTCCTCCGTC 
GTCTCGAAGA CATTGTCAAG GTCTGGGACG AGCTAGAGAC AATCACTCTG GACCAAATGA 
GCGATGACCA AATGCTGACG GCAAAGAAGA TGGGATACTC CGACGTTCAA ATTGCTGAGT 
GCTTAGGTGG AAATTCTACG GAGGACGATG TTCGTGCCAA ACGTATCGCT GGCGGTATCC 
TGCCTTTCAA TAAGCAGATT GATACCCTCG CTGCCGAATA CCCCGCGGAG ACCAACTACT 
TGTACATGAC GTATCACGGT ATGGAAAATG ATGTTAAACC CGCCGATGGT GGTGTCATTG 
TCCTTGGAAG TGGAGCTTAC CGCATTGGTT CTTCAATTGA GTTCGATTGG TGTGGTGTTA 
GTTGCATCCG GACTCTCCGC CACTTGGGTT ACAAGTCGAC GATGATCAAC TACAATCCCG 
AGACTGTGTC GACTGATTAC GATGAGTGCG ATCGTCTGTA CTTTGAAGAG CTCAGCAAGG 
AGCGTGTTTT GGATATCTAC CACCGCGACA AATCGGATGG TGTCATTGTT AGTGTTGGAG 
GACAAATTCC CAACGGTCTC GCTATTCCGC TCGACAAGGC TGGCGTCAAG ATTCTCGGAA 
CCACCGCCAA AATGATCGAC AACGCCGAGG ACCGTAACAA GTTCTCCGAC ATGATTGATG 
AGATTGGTGT CCAGCAACCG GCGTGGCGAG AGCTCACCAC TTCACAGGAC GCCTTGGACT 
TTGCCGCCAA GGTCGGCTAT CCCGTTCTAG TCCGTCCATC CTATGTTCTT TCCGGAGCCG 
CCATGAATGT TGCGTATAAC GATGACCAGC TCCGTGCCTG TTTGGAAGAA GCTGCTACTG 
TATCCAAGGA ACACCCCGTT GTGATTTCCG ACTTTATCGA AGGCGCCGTC GAGATTGAAT 
GCGATGGTGT AGGTAAAGAC GGCGAACTCA TTGCTGCCGC AATCCATGAG CACATTGAAA 
ATGCCGGTGT TCACTCTGGT GATGCCTCGT TGGTCCTTCC ACCCCACACT CTGTCGGCGT 
ACACCAAAGA ACGAGTCCGC GAAGCCGCCC GTAAGATTGT CAAACGCCTC GACATTACTG 
GACCGGTCAA CATCCAATTC GTTGCCAAGG GAACCGATGT CATGTGCATC GAATGCAACG 
TCCGTGCCTC CCGCTCATTT CCTTTTGTCT CCAAAACAAT GGGAGTTGAC TTTATTGAGG 
CCGCCACCAA GGCCATTGTT GGCGAAGACA CGAGTAACAT GAACTTGCCT ACTTTGGAAA 
CCCGCGACCG TCCCAACGGG TTTGTCGGTG TCAAGGTCCC GATGTTCTCC TTTGCTCGTC 
TCCGTGGATC CGACCCTGTA CTCGGAGTCG AGATGGCCTC CACCGGAGAA GTGGCTTGTT 
TCGGAGCTTC CAAGGAAGAA GCCTTCCTCA AGGCACTTCT TTCGACCGGT TTCAAAATGC 
CCGAAAAGAA AATTCTCGTT TCGGTCCAGG AAGAACTTAT CGACGAGTTT ACGCATTCTG 
CTTACCAGCT GCACGAGCTC GGGTACACGC TCGTTGCAAC CGAAGCGACT GCCAAGGCTT 
TGGCAAAGAA CCGTGTGCCT TGCGAAGTCG TCGCTTACCC CACGGACACC TCGGGTGCTC 
GTACGGCGGT GGACATGATC CGGGACGAAG AGATTGGCAT GGTGATCAAT ATTCCCACAC 
ACCAGTCCAA GCGTTTGAAC GACAACTTCC AAATGCGTCG ATCAGCTGTG GATTTCGGTA 
CACCGCTCTT GACTAACCTC AACTTGGTCA AGATGTTTGC TGACTCTGTT TACCTTCACA 
AGAAGGAGGG GTTGACCGGC CTCGAACCCA CCACTTTGTT TGAGCACTAC GCCGCCGAGA 
AGGATTCCGA CGCGTGGACC AGTCCCACTG AATTCCATTA AAGTCGTACG CCGGGCATCT 
TGGGATGATA GAGGATTGTA GACAGGTTTA CAACGTCGGG GTGACGACGA GATGGAAGCA 
CAATGTCAAC ATAAACGGTG TACATTTACA GCATTTACAA TTAATCAGGA AAGAGTAGTA 
AATAATTGCG AAATTTCGAA CGCGGACTGT AGAGTATGTA AACATGCAAA AGAGGGTTTC 
CGTACCATTC GTGCTGCTGG CCCCCAGCCA CCCTTCGTGT TGGAACGCTC CCGGCACCTG 
GTTCCGAGGC ATGCACCACA CTCACGGTGC GACAATCGTA CCGTTGTTGT TAGGCTTCGG 
GCTTGGCGGC CCCGGGTCCG GTCGGAATGA TTTCCCCCGC ACTTTCCAAA ACACGGGCAA 
AGTATTCAAT GGTCTTTTCC AAGCCTTTTT GTACCTTGAC CTGGGGTTCC CAGCCCAGTT 
CTCGCTTGGC CGTGGTGATA TCCGGTCGAC GTTGGGAGGG GTCGTCCTCG GATTTGGGTA 
AGAAGATAAT GTCCGACGTA CTCTTGGTGA GTTCTTGAAT GTAGGTGGCA AAGTCCTTGA 
CGGAATATTC TTCCGGATTG CCGAGATTGA CGGGAAGATC GTAATTGCCG TTCATGAGCG 
CGTAGAGACC GTCGACGAGA TCGGTAACGT ACTGGAAGGA TCGTGTTTGT TTGCCTTCGC 
CGTAAATAGT CATGTTCTTG TTCTGCAGGG CTTGTATGAT AAAGTTGGAA ACGACGCGTC 
CGTCATTGGG GTGCATGCGC GGACCAAAGG TGTTGAATAT CCGTGCGACG CGGACGTCGA 
CGCCGTTTTG GTTCTTGTAA CTGTACATCA TGGTCTCGGC CACGCGTTTG CCTTCGTCGT 
AGCAGGAGCG GGGTCCGATG GTGTTAACGT TTCCCCAGTA GGATTCGGGC TGTGGGTGTA 
CCTTGGGATC GCCGTATATT TCGGAGGTGC TGGTGAGTAG AATCTTGGCG CGGACGCGTT 
TGGCGAGTCC GAGCATGTTG AGGGTCCCCA TGGTGGACGT TTTGATGGTT TTGACCGGAT 
TGTACTGGTA ATGCGGAGGT GACGCCGGAC AGGCCAAGTG GTAGATTTCG TCTACTTCGA 
GTTGGATTGG TTCGGTGACA TCGTGCACCA CGAGACTGTT CGGTGTATGA ATAACAGCAT 
GCACAAACGG TGTGTTGTGA GTGTGTGTTT G 

 

Protein sequence

MTGRSFGCHE SVEGEVVFAT GMVGYPESLT DPSYQGQILT VTTPMVGNYG VPDRKAVDEL 
GLPAYFESSR IHATGLIVQD YSHHYSHWKA ASSLGDWLKE EGIPGLSDID TRMLTKKIRE 
KGAMLARIEV DLDAPVPDFG KMVDPNARHL VNEVSTKEVK VYGKGNPTKV IAVDGGMKFN 
IIRQLCKRGV ELTVVPWDYP FASEMHKYDG LFLSNGPGDP VMCDVTIKEL EKVISVPDSE 
VKPIFGICLG NQLMGIAAGG IAKKLPFGNR GQNQPVLNHQ TGECYITPQN HGFHIDCATL 
KPGWKTLFTN ANDGSNEGIA HETRPYFTAQ FHPEASSGPT DTEFMFDTFL EACKKPMDKI 
RFPVRKPAPP RSNAKKVLLL GSGGTSIGQA GEFDYSGGQA IKALKEEGLE VVLMNPNIAS 
VQTNTDDKSA SKADHVFFLP VTPEFVEEVI KKEKPDGVII SMGGQTALNC AVQMHESGTF 
EKYGVKILGT QIPAVINTED RQLFSDRLNE INEKIAESYT AQTIPEAVEH AKKVGYPLMI 
RSAFALGGLG SGICVDEDHL KDMAKKALSV SPQILVEKSM KGWKEVEYEV VRDTHDNCVT 
VCNMENFDPL GIHTGDSIVM APSQTLSNEE YHMLRETAIK VVRHLGIVGE CNIQYALHPE 
SLEYAIIEVN ARLSRSSALA SKATGYPLAF VAAKLCLGIP LTEVVNSVTK KTQAAFEPSL 
DYIVTKIPRW DMSKFEGVST EIGSAMKSVG EVMGIGRTLE ESLQKALRMV DPSVAGFQPK 
NRFETMAALR KELEVPTDKR IFAIAQALHE KTMTVQEIHD ITKIDHWFLR RLEDIVKVWD 
ELETITLDQM SDDQMLTAKK MGYSDVQIAE CLGGNSTEDD VRAKRIAGGI LPFNKQIDTL 
AAEYPAETNY LYMTYHGMEN DVKPADGGVI VLGSGAYRIG SSIEFDWCGV SCIRTLRHLG 
YKSTMINYNP ETVSTDYDEC DRLYFEELSK ERVLDIYHRD KSDGVIVSVG GQIPNGLAIP 
LDKAGVKILG TTAKMIDNAE DRNKFSDMID EIGVQQPAWR ELTTSQDALD FAAKVGYPVL 
VRPSYVLSGA AMNVAYNDDQ LRACLEEAAT VSKEHPVVIS DFIEGAVEIE CDGVGKDGEL 
IAAAIHEHIE NAGVHSGDAS LVLPPHTLSA YTKERVREAA RKIVKRLDIT GPVNIQFVAK 
GTDVMCIECN VRASRSFPFV SKTMGVDFIE AATKAIVGED TSNMNLPTLE TRDRPNGFVG 
VKVPMFSFAR LRGSDPVLGV EMASTGEVAC FGASKEEAFL KALLSTGFKM PEKKILVSVQ 
EELIDEFTHS AYQLHELGYT LVATEATAKA LAKNRVPCEV VAYPTDTSGA RTAVDMIRDE 
EIGMVINIPT HQSKRLNDNF QMRRSAVDFG TPLLTNLNLV KMFADSVYLH KKEGLTGLEP 
TTLFEHYAAE KDSDAWTSPT EFH