| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_1905 |
|---|
| Symbol | |
|---|
| ID | 7199348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011699 |
|---|
| Strand | - |
|---|
| Start bp | 79481 |
|---|
| End bp | 80834 |
|---|
| Gene Length | 1354 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185516 |
|---|
| Protein GI | 219130740 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CGCATGTCCA ACGCCGAAGA CTTGCGACCA GAACTTGATC GACGAGTCAA GGATGTCACG
GAAGTCCTCG ACGTACCCGA ACCAGCCGCA ATGGTACTAC TCAGCCAGTA CAACTGGAGC
AAGGAAGAAT TGTTGGAAGC GTACATGGCC AACGCCGACA AACTACTGAA AGCACACGGT
GTCTACCGTC GCTGCGGACA TGCGCTAAAT CCGCCGTCCA ATCGGACCAA GTCTTGCGCA
ATCTGCTACG ATGATGACGT GGACGAAATG CTCGCCATGC CCTGTGGACA CGAATTTTGC
CTCGACTGCT GGCACGACTT TTCCGTCGCC GCCATTGCCG AAGGCCCCGT GTGCATCAAC
ACCACGTGTC CACACGCGGG ATGTCCCGAA AAAGTTACCG CCATCGAATT CGAACGGTCC
CTGGGGAAAC AGCACGTGGA CTACCAAAAA TTCCTTACCT ACCAAATTCG ATCCTTCGTC
GAATCCAACG GATTGTCACG CTGGTGTCCG GGAGCGGGTT GCGAGCGTGT CGCGTGTGCG
GTATCTGCGG CCGCCATGGA GTCGGAAGGG AGCGTGGCCA CCTGTGATAC CTGTGCGACC
TCCTTTTGTT TGCGCTGCGG CCAGGAACCA CACGCTCCGG CCAGTTGTCC CGAAATCGCT
CTGTGGATGG AAAAATGTCG GAACGAGTCC GAAACCGCCA ACTGGATTTT GGCCAACACC
AAATCGTGTC CCAAATGTAT GTCGCGGATT GAAAAGAACC AAGGCTGCAA TCACATGAGT
AAGTGTCGTC GGAACTCGAA ACGCATTACA CCAAAAGTGT CGTGGTGCTC TACTCACGTC
CCTTTTTCCA ACTTGGTTTC GTTTATGACC AGGCTGCCAA CGCTGTAAAT ACGAATTTTG
CTGGATTTGC ATGGGCGACT GGAGTGAACA CGGGGCCAAC ACGGGCGGCT ACTATAAATG
CAATAAGTAT GATTCCGACC AACCATCGAG CAGCGGCCCG GTAGATCAGT CCGATGCTGC
TAAGGCCAAA CGGGACCTGG ATCGTTACTT GCACTACTAC AAACGCTACC ACGCACATTC
GGAAGCTCAG GCGTTTGCCA GAAAGCAATT GAAAGAAACG GAAGGCCGCA TGGTGCTTTT
ACAGGAATCG TCAGACAACG GGAAGTGGTC GGACGTGGAG TTTTTGAAAA CAGCCAATGA
ACAGTTGGTG GAATGCCGCC GTGTTTTGAA GTACACCTAC ACTTTTGCAT ACTACTTGGA
TCCGCGGCTA AAAATGCAAC GGGAACGATT CGAGCATCAT CAAGAAATGC TGGAGCGCTT
CACCGAAAAT TTATCGGAAC TTTCGGAAAG ACCC
|
|---|
| Protein sequence | RMSNAEDLRP ELDRRVKDVT EVLDVPEPAA MVLLSQYNWS KEELLEAYMA NADKLLKAHG
VYRRCGHALN PPSNRTKSCA ICYDDDVDEM LAMPCGHEFC LDCWHDFSVA AIAEGPVCIN
TTCPHAGCPE KVTAIEFERS LGKQHVDYQK FLTYQIRSFV ESNGLSRWCP GAGCERVACA
VSAAAMESEG SVATCDTCAT SFCLRCGQEP HAPASCPEIA LWMEKCRNES ETANWILANT
KSCPKCMSRI EKNQGCNHMS CQRCKYEFCW ICMGDWSEHG ANTGGYYKCN KYDSDQPSSS
GPVDQSDAAK AKRDLDRYLH YYKRYHAHSE AQAFARKQLK ETEGRMVLLQ ESSDNGKWSD
VEFLKTANEQ LVECRRVLKY TYTFAYYLDP RLKMQRERFE HHQEMLERFT ENLSELSERP
|
|---|
| |