| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55200 |
|---|
| Symbol | ATPase2-3A |
|---|
| ID | 7199258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011698 |
|---|
| Strand | - |
|---|
| Start bp | 90455 |
|---|
| End bp | 93721 |
|---|
| Gene Length | 3267 bp |
|---|
| Protein Length | 969 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | P3A, P type ATPase |
|---|
| Protein accession | XP_002185425 |
|---|
| Protein GI | 219130548 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0530284 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATC TGGAAGAAGG AGGCCGTCTC ACCGAAACCG CCGCCATTGG GGGCGGTACC
CACCCCACGA CGAGCACGAT CCCCCAACAG CCCACGGAAG GTGAATATGA CTGGGTACCG
ACGGATCCCA CATCCGGATT AACCTCGGAA CAAGTCGCCC AAGCCTTGGC TCGCTACGGT
CCCAACGAAA TACCCGTCCC CGACACACCC CTCTATCTAC TCTTCGTCCG ACAATTCGTC
GGATTCTTGC CCTTTCTCAT TGAACTCGCC GCCATCGTCT CCCTCGCCGT CCAAGATTAC
ATCGATTTCG GGATCATTCT AGGCATTCTA CTCGTCAACG GCTGTCTCGG ATTCCGGGAA
GAGTACCACG CCAAGAAGAG TCTACAAGCC GTCAGCGCCA GTTTAGATTC CGAAATCGCC
GTCCGCCGGG ACGGCCTCAC AGCCAGCCTT CTCGTCAAGC AGCTCGTCCC GGGTGATATT
GTCTTTTTAG TGGGCGGGAC CATTGTCCCC GCCGACGTTC TCTGGATTTC CGGTGACGTT
GTCCAGCTCG ATACCGCCGC ACTCACCGGC GAACCTTTGC CCCGCAAGTA TCCCAGTGCC
GAACACGGAC GGACACTCTT GTCCGGAACC ACCGTCACGG CCGGTGAATG CTACGGACAA
GTCCTCCGTA TCGGTACGGC CACCGAAATT GGACAAGCGC AGGTAGACAT TCTACAGGAC
AAGTCCGTGC GGATCGTTTC CGTCTTTCAG CAAAAAATTA TGAAGGTCGT TCAGATGCTC
ATTGCCGGTT CACTCATTGT CGTACTCGCC GTCCTACTCG TCAAGGGAAT CGTCTACGAT
GGCTTTGACG ACAACGTCAA GGAAACGATT CTGGACGCCT TGTCCATCCT CATTGCGTCC
ATCCCCGTCG CCCTGCCCCT GGTCGTACAG GTAAACCTGG CTCTGGGAGC CTCCTTCCTC
GCCAAGGAAC ATCACGCCAT TGTCACGTCC ATTCCCGCTC TACAAGATAT TGCCTCCATG
TCCATGTTGT GCAGGTACGT TGGCGTGTGT GTATGTGTGT ATGCAAGTGT ATATATGTAA
TAACAGCACG TTCAATACTC ACGTTTCGGT TTATTATTTG CTGGGAATAC TCCAGTGACA
AAACAGGGAC ACTCACCACG GCCAACATGT CCGTGATTCC GGAACAAGTC TTTGCGGCCG
AGGGCTTTAC CACGGAGCAA GTCCTGTTGT ACGCCTACCT GTGTTCCAAT CCCGACAAAA
AAGACGATCC GATTGATCGA GCCGTGGTTG CCGCCTTTTT ACAGTCGGCC AAAGCCAACG
AAAAAGACGA TTACGTGCAA ACCGAAATCA TCGGGTTCAA CCCCACCGTG AAACGCGTGG
TGGCCTTTGT CGGACACGGC AACGAAACCA TCACGATTGC CAAGGGCTTG CCGGCCAAAA
TTGTCAATAC CCAAGCTGGA GGCGAGGACG ATCACGAACT TCAATGGCAG GTCAACCGGG
CGGCCGATCG GGACTTTCTC GATCGCGTGG GAAACGTCGA TACGGGTTTG AGCAAGGCGG
GGTACAAGAC GATCGGGATT GGCGTCTGTT TCGGTAACGC TCGGACAATG AAGAATCCGG
TCTGGAAATT TGCCGGACTC GTACCAATGT TGGATCCTCC ACGGGAAGAT ACCCGGGCGA
CAATTGAATC GCTCCATCAC GCCAACATTT CGATCAAAAT GATCACGGGC GATCATCAGA
ATGGTATGTA TCTCTTTCGA AAGGACCGGT ATGCTAGTAG TTCCCCTTCG GGCTTTCTCT
TTTGACACCG CTGCATTTTG ACTACAGTGG GAAAAGAGAC CGCTCGTTTG ATCGGTCTGG
GAACGGACAT TCGAACCGGA GAAGAGATTC GTCATGCATC TAGTCAGGAT AAGAAACGAC
TTGTATGGGA GGCGGACGGC TTCGCGGCAG TTCTACCGAG TGACAAACGT GAGGTTGTCA
TGATTCTCCG CAACGAATAC GGGATTGTGA CAGGCATGAC TGGGGATGTA AGTGATGATG
TTGGTGTTGC CAGGATGTGG TCGTTTCATC TTACTCATTT GAAACCAATT TTGGTCACCG
TATCGTCTAG GGTGTTAACG ATGCTCCAGC CCTCTCGGCC GCTCAGGTGG GAATTGCCGT
TGAAGGAGCC ACCGACGCCG CCAAGAATGC GGCAGACCTC ATTCTTACCG AGCCCGGTCT
CAGTCCGATT TATGGTGCGG TTCTGGAGTC CCGCCGTATC TTTCTACGCA TTAAAGGATA
CGTGATTTAT CGCGTAGCAG CGTCGATTAT CATGGTCCTG ACTCTCTCCA TCATCATATT
TGCGTCGGGC TGCGCAGTTG ACTCATTGTT GGTCATCATA TTGGCATTGT TGAATGATAT
TTCTATGATT CCTGTGGCAT ACGACAATGC GTCCGCCACA ACGAAACCAC AGCTTCCTCG
AGCCAGCAAG TTGGTGCTAA TGTCTCTCTA CTACGGCATT TGCCAGACTG CGTTGGGTCT
TTCTTTTATC TTCATCATGG ATCATGCTAA AGATTTGGAC GGGCCAATTG CACTCAATAG
AGCGTGTTCG TCGGAAACGC GAGGTTTTAT TTGGTTTCAT TTGACCCTGG TTACGGAACT
TATGATTTTC TCGGTGCGTG CCCCCGGATC CATGCTGTAC TCGACACCTT CCATATTTTT
GATTATTTCA GTGTTGGGCA CTTGTGCCGG TAGTGCATTC ATTGCAATGT ACGGGAGTGA
GTTGTCGGGG TTAAATGTGG TTTGGATTCT TCTTTTCAAC CTCGGAACAT TGGTATTGGT
TGATTTCGGC AAAATCATGT TTCGTGCACT TATTGGTGAG GAGCCCGGCG ACATCATTGC
AAGTGATGAG CTTTTGTCCG TTTCTCCCAT CAAGACAGAA ACGGCGAAGA ACTTGGAAAA
GAAACTGCGA TATGTTGTAC ACAACGAATC GCTGTTAGAA CCAGAGGATC GTCAGCACAT
GGTCCAAGTG CGACGTCGGC GCCGTATGAT GTCGGAAGGG TTTTTCTCGG GAGACGGGGG
CGGCTGGAAT CAAGGCTTTG TTGATCGGCG TCGGGTTAAC AGCATCTTGG CGCAGCAGGG
ATCCGCTTTT TTTCAGAATC GAGGGGATCG CTCGAAGCAG ACTACCATGC CTTGGTAGGA
ATTACAAGTC TACGACAGAG AGTGAAGAAG CAATCGTCAA CAAAAAGTGA TTTCTACCGT
AATTGTTAAA GGAAAGTCGT TTGCGTT
|
|---|
| Protein sequence | MPDLEEGGRL TETAAIGGGT HPTTSTIPQQ PTEGEYDWVP TDPTSGLTSE QVAQALARYG
PNEIPVPDTP LYLLFVRQFV GFLPFLIELA AIVSLAVQDY IDFGIILGIL LVNGCLGFRE
EYHAKKSLQA VSASLDSEIA VRRDGLTASL LVKQLVPGDI VFLVGGTIVP ADVLWISGDV
VQLDTAALTG EPLPRKYPSA EHGRTLLSGT TVTAGECYGQ VLRIGTATEI GQAQVDILQD
KSVRIVSVFQ QKIMKVVQML IAGSLIVVLA VLLVKGIVYD GFDDNVKETI LDALSILIAS
IPVALPLVVQ VNLALGASFL AKEHHAIVTS IPALQDIASM SMLCSDKTGT LTTANMSVIP
EQVFAAEGFT TEQVLLYAYL CSNPDKKDDP IDRAVVAAFL QSAKANEKDD YVQTEIIGFN
PTVKRVVAFV GHGNETITIA KGLPAKIVNT QAGGEDDHEL QWQVNRAADR DFLDRVGNVD
TGLSKAGYKT IGIGVCFGNA RTMKNPVWKF AGLVPMLDPP REDTRATIES LHHANISIKM
ITGDHQNVGK ETARLIGLGT DIRTGEEIRH ASSQDKKRLV WEADGFAAVL PSDKREVVMI
LRNEYGIVTG MTGDGVNDAP ALSAAQVGIA VEGATDAAKN AADLILTEPG LSPIYGAVLE
SRRIFLRIKG YVIYRVAASI IMVLTLSIII FASGCAVDSL LVIILALLND ISMIPVAYDN
ASATTKPQLP RASKLVLMSL YYGICQTALG LSFIFIMDHA KDLDGPIALN RACSSETRGF
IWFHLTLVTE LMIFSVRAPG SMLYSTPSIF LIISVLGTCA GSAFIAMYGS ELSGLNVVWI
LLFNLGTLVL VDFGKIMFRA LIGEEPGDII ASDELLSVSP IKTETAKNLE KKLRYVVHNE
SLLEPEDRQH MVQVRRRRRM MSEGFFSGDG GGWNQGFVDR RRVNSILAQQ GSAFFQNRGD
RSKQTTMPW
|
|---|
| |