| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_55198 |
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| Symbol | |
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| ID | 7199249 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | - |
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| Start bp | 50287 |
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| End bp | 53582 |
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| Gene Length | 3296 bp |
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| Protein Length | 894 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | STT3 subunit-like protein |
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| Protein accession | XP_002185420 |
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| Protein GI | 219130538 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.835655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTTCGCAT CCGTATTGCC TTCGTCGTTG GTCACGCTTT TCTCTCGATC GATATCTCTT
TCTCTCGATC GATACCTGCT TGTTTGCTTG TAGCGATTGT GAGGATTAAT TGGGCTTGTC
AGTGTTGGTC ATACTGGGGT TACACTGTCC GCACAGGATG TCCCCGTCGA CGATTTCCTC
CACGCGTCCG CCGGAACCCT CGTCCGACCT TTTGTCGTGG GTTTTGCTCG GAGGGACGGC
TTACGCCGTG TATGTGATCC TGCACACGGC GTATCGCATC CGTATGGGTG CCATTGACGA
TTTTGGCCTC GTCATTCACG AATTTGACCC CTGGGTACGT ACGGGTCAAT GGGCCTCGAG
TTGCGCTCCA GACATGGCGC GACGGACTGT CCAAGCGCTA TTACCGACCG GCTTTGTTAC
GGTGACGCTA ATCATGAATG GCACCGCATA GCTCACTCTC TTCTACTGCT TCTTTGCGTT
TTTGTGGTCG AACAGTTCAA TTACCGCGCG ACGGAATATT TGTACTACAA CGGCATCAAG
GACTTTTTCC AATGGTTCGA TTACATGAGT TGGTATCCAT TGGGACGTCC CGTTGGTACC
ACCATTTATC CCGGTATGCA GTTTACCGCC GTCGCTATTA AGCGGTACTT GCTGGATAGT
GTTATGAGTT TGAACGACAT TTGTTGTTAC ATACCCGTTT GGTTCGGCGT GATGGCCTCG
TTTGTTACCG GCTCCATCGC CTACGAAGTT TCTATTCCCC ACAATACCCA TTCCTCCCTG
CTCGGATTCA TTTGGGACAT TTACAAGGGT CAAAAGAGGA CGTACCAAGG TACCGACGTC
GATCGCAGCG GCTCGACACC CCTACTCTTG GGATTCTGGT CTCCCGCTAT TGGCTGCTCG
ATTTTCGCCA TGGCCATGAT GGCCATCGTT CCTGCCCATT TGATGCGCTC CATGGGCGGT
GGATACGACA ACGAAAGCAT CGCCGTATTT GCCATGGTAC TCACCTTTTA TTGCTGGGTA
CGCTCCCTGC GCAGTACTTC CGGTAGTGCC CACGCACAAA CCTACGTCGC ATGGAGCGTC
GCCACGGGGT TAGCTTACTT TTACATGGTC GCCGCCTGGG GAGGCTACGT CTTTGTTCTC
AACCTAATTG GCGTACACGC GGCCTTTCTC GTCCTCGCCG GACGCTTTTC TACCCAGACC
TACGTCGCGT ACACGTTGTT TTACAGTATC GGTACCGCCT TGGCCGTTCA AATTCCGGTG
GTGGGATGGG CACCACTCAA GTCACTCGAG CAACTCGGAC CGGGTGCCGT CTTTTTGGGA
TACCAGCTTT TGTATGTTTG TGAAGTCCTC CGGAAACGGC AAAATTTGAC CCGGGCACAG
GCGTGGAAAC TGCGTGTACA AATGTGTGCC ATCGCTGGGG CGCTTGTCAT GTTTGCTGCC
TTTTTTCTAG CCCCCAAGGG ATACTTTGGT CCCTTGTCAT CGCGGGTTCG TGGATTGTTC
GTTGCGCATA CCAAGACGGG CAATCCGCTG GTGGATTCTG TCGCTGAACA CCAGGCCGCT
TCGTCGCGGG CCTATTTTCA ATACTTGCAT CACGTTTGTT CCCTGGCACC CGTGGGTTAC
ATACTCGTGT TTTTCAACTT GAGCGACGCC AGTTCCTTTC TGATCGTTTG GGCGACGGCA
GCCTATTTCT TTTCCCACAA AATGGTTCGT CTCATTCTAC TGACGGCGCC CATTGGGTCG
ATTCTTGGTG GTATTACCGC TGGTCGTCTC TTTACCTGGT GCCTGCACCA GTGGTGGGAC
ATCGTGGATG ATGATGAGGC CAATAAAGGT GAGTCACCCG CCGTGGTGAC TAAAACAACC
AAGAAGGACG GCAAGGTCAC TATGAAAGCA ACCAAGGAGA AAAAGAAAAA GATTCCCAAA
ACTGTCGGCA AATCCGATAA GTATACTTCG GAAAGCTTTT CTTCGTTTGA AGGATTAGCC
GCCATTCAAG AAACAGCCAG ATTAGCTTTG AATACTACGG AAGGCATCCT TGTCCGTCGA
AGCGTGGCGC TTGTCCTTTT GCTCATCGGA TACTTTCTGG GTGGAAGCTT TAATAATTAC
AGTTGGCGGC TGAGTCAAGA CCTTTCCAAC CCGACCATCA TTATGCGAGC GCGCCTCCGT
GATGGTCAAC TAGTCATGAT TGACGATTAC CGTGAAGCCT ATTGGTGGTT GAAAGACAAC
ACTCCGGAAG ACTCCCGCAT CATGGCGTGG TGGGACTATG GTTACCAGAT TGCCGGTATT
GCGAATCGGA CAAGCATCGC GGATGGAAAT ACGTGGAATC ATGAGCACAT TGCGCTACTC
GGAAAAGCGT TGACGACCGG TGTCGAGGAG GGATACGAGA TTGCTCGTCA TTGGGCCGAT
TACGTTCTGT TGTGGACCGG CGGTGGCGGT GACGACTTGG CCAAATCTCC GCATTTGGCT
CGCATCGCCA ACTCGGTTTA TCGTGATCAC TGTCCCGACG ATCCTACCTG TCGGGCCTTT
GGCTTTGTGG ATCGCGAGGG AACCCCGTCG GCCATGATGA AGCGCAGCTT TTTGTTCAAT
CTTCACGGCC ATCAAATCAA GCCGGAAGCC AATGCACCCG CGGACAAGTT CCAGGAAGTT
TTCCGGTCCA AGTACGGCAA GGTGCGGATC TTCAAGATCC TCGGAGTCTC GCAGGAATCC
AAGGAATGGG TTGCCGATCC ATCCAATCGT ATCTGTGACG CTCCTGGTTC ATGGTTTTGT
CGCGGTCAGT ACCCACCGGG ATTGAGTCGA GTTCTGGAAG GCAAAAAAGA CTTTTCACAA
TTAGAAGATT TCAACCGGGG CGATCGGGAT GAAGAATACA CGCGTCGGTA TTTCGAAGAT
CTGAAGGACC CGGACAGCGC CCGGAGAAAG GCCATGGCCA AAGAAATTGA ACGCAACAAA
GAACAGGTCG ACGCCGAAGT ACAGGAGAAG AAACATGTCT CGGTTGACGA TATATATAAC
ACTTGGGAAA ACACCGACGA CACAACACGC ATGTGGAACT TAATCAATTC AAACGCCGTT
GAGGAATTAA AGGCATGGCT CGAAGCGGAG CCGCATAAAG CATATGTGAG GTCAGAGGAT
GGGAGAGGAC CTATGTGGTG GGCTTTTGAG AAGCGCAACG AGGATGTAAC CAAGCTTCTC
ATGAAGGCAG GAGTTCCTTA TACGGATCGT GACGGCAGCG GAAAAACCCC ATTGGATTTG
CAACAGGGAG GCTAGATTAA ATTTTGCTTC GTTCGCTTTA AAATCGATTT TACAAC
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| Protein sequence | MSPSTISSTR PPEPSSDLLS WVLLGGTAYA VYVILHTAYR IRMGAIDDFG LVIHEFDPWF
NYRATEYLYY NGIKDFFQWF DYMSWYPLGR PVGTTIYPGM QFTAVAIKRY LLDSVMSLND
ICCYIPVWFG VMASGSTPLL LGFWSPAIGC SIFAMAMMAI VPAHLMRSMG GGYDNESIAV
FAMVLTFYCW VRSLRSTSGS AHAQTYVAWS VATGLAYFYM VAAWGGYVFV LNLIGVHAAF
LVLAGRFSTQ TYVAYTLFYS IGTALAVQIP VVGWAPLKSL EQLGPGAVFL GYQLLYVCEV
LRKRQNLTRA QAWKLRVQMC AIAGALVMFA AFFLAPKGYF GPLSSRVRGL FVAHTKTGNP
LVDSVAEHQA ASSRAYFQYL HHVCSLAPVG YILVFFNLSD ASSFLIVWAT AAYFFSHKMV
RLILLTAPIG SILGGITAGP TKEKKKKIPK TVGKSDKYTS ESFSSFEGLA AIQETARLAL
NTTEGILVRR SVALVLLLIG YFLGGSFNNY SWRLSQDLSN PTIIMRARLR DGQLVMIDDY
REAYWWLKDN TPEDSRIMAW WDYGYQIAGI ANRTSIADGN TWNHEHIALL GKALTTGVEE
GYEIARHWAD YVLLWTGGGG DDLAKSPHLA RIANSVYRDH CPDDPTCRAF GFVDREGTPS
AMMKRSFLFN LHGHQIKPEA NAPADKFQEV FRSKYGKVRI FKILGVSQES KEWVADPSNR
ICDAPGSWFC RGQYPPGLSR VLEGKKDFSQ LEDFNRGDRD EEYTRRYFED LKDPDSARRK
AMAKEIERNK EQVDAEVQEK KHVSVDDIYN TWENTDDTTR MWNLINSNAV EELKAWLEAE
PHKAYVRSED GRGPMWWAFE KRNEDVTKLL MKAGVPYTDR DGSGKTPLDL QQGG
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