Gene PHATRDRAFT_50523 details

Gene Information

• Locus tag: PHATRDRAFT_50523
• ID: 7199297
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: -
• Start bp: 309435
• End bp: 311802
• Gene Length: 2368 bp
• Protein Length: 366 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002185467
• Protein GI: 219130636

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGTGA TTGCTGCTGC GGTTGTGGGG GTGGTCTCGC ACCGTGTGGG CGGCGTGTAT 
GTTCCGTGAG CGGCACGTTG TCATTAGTCG ATTCCGTCGG ACCAAACAAC AAGACGGAAC 
TGGAGTCCAT CCCCTCAGCG TGGGGTAGCA ACAACGCCGG ACGTGCCGTA AAAATTGTCC 
CGGACTCTCC CGCTGTACCA ACTTGGTTGC CCTTGTTGGT CGTTCGCAGA CTGCGAATAC 
GACGATCTCG CATTCAATAC CAATTGAGGG GACTTGACCA CCGGTTCAAG GAACACTCCC 
GCAAGGAACG GTACTTGTTA TGCTACTCAA ACAGTTATAT CAGGTTAGTC ATGCGAGGGC 
GAGGTGAAGT CTTCTTTCGA GAGTCTGCCA TGAGGAAAAT AGGTTTTGGG CAGTTTGGGG 
TCAAAAATGT AACCCGTGAC TGTGAGTCGC GGGATATACC TTGATAATTC AGAGGCATTC 
ACATTTTTCG TGGGACTGAA GTTACCGTAT CTGTATATCC CCATTATTTC AGCACAATGA 
AGCAACATTC GCTTGAACGA ACAACAGCGT GGTTGACGAC TTGGAGTCTC ATTCTGCTCG 
TGGCCGTTGC TCAAGAAGAT GTTCACCCTG ACGTAGTTGC CGTTGTTGAT GTTGCTGGAG 
GTGTACGACC GACACCACTT TGGGCAAGCA GTTATTCGGA CGGCGAGAAT TGCTACTGCC 
TTCCTTCGTT GGATAGCGCC ATTGGGAACT TTGTCGTAGA AACGCCATTA GGGTGGCTGA 
CGACGCAGGA AGTGTGCGAT CTGCTAGGAA CAGGACCAGG AAGACTAGGA CAACCCCTTT 
ACAATGATAT CCAATGCGGT AACGGCCCCC CAAACGCTGA TGAAAACGAA TTCCTTTGTC 
CGGGACGAAC CGATGTAAGT GATTGCGAGG AAAAAGCCGA GCGCTGTCCA CTAGTAGAAA 
CAAATATATC TCAACGGTAA GCTTTGTACT GATTTGCTCT TCCTCAGATT GGGGAAACAG 
GTTGTGGTCA AATAGGACCC AAATGGAATT TTGATAATGC AAACCTTGCG GACGGCCCCC 
CACGACTTCC ATCGTTGCCT GAGGACATTC ATCCCGATAT CGTTGCGGTG ATCGACGTTG 
TGGGTGGTGT GACGCCGAAT GGAAGATCGT GGGCCGACAG CTATTCCTTT GGCAACAAGT 
GCTATTGTGC GACAACGTTT GATCACGACA TTGCGGACGT GCTAGTCGAA ACACCGCAGG 
GATGGATGAC GATCCGTCAA GCTTGCGAGT TACTTGGACC GGGTCCCGGT ATTGAAGGAC 
GACCGGTGTA CAATGACATA CAGTGCGGGA ATGGACCACC TAATAATGCA GGCGATGAGC 
ACGTGTGTCC TGGACGAACC GATGTACGTC GACTGGAACG CGGTAGACTG GCTAGTATTT 
TCAGACCGTT GTTTTCTCGG ACTGTTTATA ATGAAATGCC TCACCATGAT GCTTCTCCGT 
TGTACAATTC ACAGCTTGGA CCAGAAGGTT GTGGTCAGAT TGGTCCCCGT TGGAATTTTG 
ATGCCATCAA GTCATTACCG CCAGGCAGCG CCCCCGCAGC TCTGCCCTCT TCTTTAGCAG 
CCGGAGCAGT GTCTGTCCCA ATGCTACCGG GCTTAGGAGT AATCACCGGA TATTTGTTCT 
GTGTTTTGAA CTGGCAACTT TTTGATCTCG TTCCGTGACA CCAAGACCTC TGGATAACCA 
CTGCAGGCTG CCCGGAAGAA AGCCAGGACG TGTTACTTTC TTTCCAGGTC GCTACGAAAA 
TACTCTGGGG CGAGCCCTGA CTCGCAAAGT GTTTACCGCG CTGAATACGG TTCGCAACGT 
GCCCCACTAC CAAGCTTTGT GCACTTATAA ATCCGCTTGT TGCTGACCAG GGGCAATATT 
GCCGGTGATG TTTGGTTTGT CGGTTCCTTG GTGGATCATC TGACTTGTGA CTTGACAAGA 
GAATCCGGAG TGCAACAGCA AGCCAAGCGA GCAACCATGT ACCCACAAGC AATTGGTCTG 
ATTCCAGTTT CTCTACTGGT GAAGCCCATG TTGTGTGGGC AGTTCTTGTT TTGGCGTATG 
TCTTTTGAAT GGCGCCCTTG TGTCGTGCCG CCTGGACACC TCTCCACCCG TTGACGGCGT 
ACGGCCCAAT GCCGTGTGCA TACGCGAGGA GCCGGACCAT GTGCATTATC ATTGCCATCA 
ACAACAATGG CAATTTGACC ATTTTGGTAC TAGTGGAAGA CAATGGACGC AGTGGTATCT 
TATTTGAGTG ACGCAGCAAA GTCCATCAAC ATTTTTGTTG ATCAGTGCCG CTATCTTTGC 
CAACAATGCC GCATTTTTAA CTTCATAC 

 

Protein sequence

MIVIAAAVVG VVSHRVGGVL VMRGRGEVFF RESAMRKIGF GQFGVKNVTR DSWLTTWSLI 
LLVAVAQEDV HPDVVAVVDV AGGVRPTPLW ASSYSDGENC YCLPSLDSAI GNFVVETPLG 
WLTTQEVCDL LGTGPGRLGQ PLYNDIQCGN GPPNADENEF LCPGRTDIGE TGCGQIGPKW 
NFDNANLADG PPRLPSLPED IHPDIVAVID VVGGVTPNGR SWADSYSFGN KCYCATTFDH 
DIADVLVETP QGWMTIRQAC ELLGPGPGIE GRPVYNDIQC GNGPPNNAGD EHVCPGRTDL 
GPEGCGQIGP RWNFDAIKSL PPGSAPAALP SSLAAGAVSV PMLPGLGVIT GYLFCVLNWQ 
LFDLVP