| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50517 |
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| Symbol | |
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| ID | 7199240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | + |
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| Start bp | 288859 |
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| End bp | 291258 |
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| Gene Length | 2400 bp |
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| Protein Length | 728 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185411 |
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| Protein GI | 219130519 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTGTGAGTCC TACTCCTCAA TAGGTTACAC AGTCCGAGTT GTGCGTCGCT GCCATTGTGG
TTACACTGAC TGTGTCGTGG ACTTTGGCAT CTTCCCCTGA AAAACAACAC ACTCACACAA
GTACGTTTCC AGTGAAAGAC ACGGTAGGCA CGCAACATGA AGCTGAAAGA TCGTATTCAA
CAATTCGAAA AGGCGGCTGG ATCCAACGTG CGCCAGGGGT TGCGTGTCGT ACACAAGGGC
ATTCGACAGG GCGTCCAATT GGCACAAAAG GGAGTCCCAC ACGTCAATCC CCCGGAAGTC
AATCCCACCC GATCCTCTGC CGTTGTGGAA GATCCGGAAA TGCCCACCAC GGCAGCGGCT
ACGGACACCT TGACAGCACC AACACCAACA ACAGCACCAC CAACCACCAC AACAAAGCTT
CCTTCCGGTG TGGTGCCGCC GTCTCCCGAC GACGGGCGGT ACGATTTCTC CTTTTTCCAA
GCTTGGTACG ATTCTCTCCA CGCCACATTG TCCGCCACGA ATGTTCTACC CACGTTCGAG
TCGGACCAAC AGACACACCC AGACCCAAAC GTACAGAAGT TCCTGCTCAC GTTAACGACG
ATTGACGCGG CTTGGAACGG ACAAAAGGCG GCCCAGACTC TGGTGGATCA ACTCGGCAAG
GCCAAACAGC CACCCACATC ACCGGAAGAA TTGGCACGAG CCCAAAAGGC CTTGCAGGAT
GCCACACAGA TGGTCAACGA TCTCCTACTC ACCGGAGAAG AAGCGGCACG GGTTCTTCTC
CACACGGATA GCGTCTTGGC GCACTTTGTC TCCTCTGATT ACGACGATAG CAATCTCATG
ACGTTGGCCG TACTCCAATC CGCCACTCCG AAAGGATTGG CAGCTTGGTG TGATCGCGGA
GATGCACCCA CCCAACAACT CTTTCGATTG TTACGGAGCG CTGATTTGAT GCGTGTCTTC
CTACAGCACG GTGGGCCCAA AAACGGGGCC TACGGACGAG CCATGGAATT GCATGAACAG
TTGTCCGCTC ATCAACACAC AGCGACTATC GATCCCGACG CGCACCGCAT CGATCCCGTA
CTCGAACGAT TGGCCCTCGC CGTGGCCTTG GAGCTGTGCA TCGATCTAAC GTCCTTTGGT
ACCAAACACC ACATTGATCC GGTGCAACGC TACGTACACT ACGAGCAAGC GTACTTGTTG
GGAGAGCTTG ATCCTGCCTT TCCCACGTTT ACGGTATGGG AACTGCGCAA CGTTGTCAAC
AGCGACGTTC CCGACGAACA GCTAGGCTGG GGAAGACAGT GCCTGAAGAA TTACCGACCC
GATTTGGTCT TGACCGACGA TCCGCAGTGG CGTTATTGTC GTATCGTCAA AACGGACGTG
GCCTACAAGG TCCCAGACTG GTACAAAGAG CCACGGTCCA TGGACCAAAT TCTATCGGGC
GGCGGAAAGT GCGGACCGCG GGCTTGGTAC GGACGTTTCG CCTGCAAAAG CTTTGGTATT
CCCACGTGGG GATGCAAACA ACCCGGACAC GCCGCCATGA CCCGGTGGAC CACCAAGGGC
TGGATGACCT GCCTTGGTGC CGGCTTTCCG TACAGCTACT GGGAAAATCG AGGCGGACTG
GATTTCCTGT TGGAGACTCA AGCGCGTGCC GCCTTCGGTA CGGATCGAAT GTATCTACAA
AGGGTTCTCC GTCTCGAGTG GTTGGCTATC TTCTACAAAG AAAGCAACAA GACTATTGTG
GACAAATGCA TGCCAAGTTC GGATAGTCCG TGGTGGGCGC TTTCGATGAT GCAACGAAAG
ACGGTCGCTC GAATCCCCCA AAGCAAACCA GCGAGGCAGT CGGACAACTT TAAGATTGTG
CAGACTCACA TTGAGACCGT CCAAGCTCAG CCCGACTCTT TGGAGACCAT CCACAGAGAT
CTCACTACGG GTCGAATCAC GGTTCCTGCC GTGGCCTTTG GCAGTTCTTC CCGAAAGGCG
GATGTCATGA AATCGTTCCT GGGCGGTCGT CAGGTCTTCC TCAAGGAGGA CGCGGTCGTT
GCGTATGTGT TGAATACCGA CCTCATCTCT CCATTGGCGG AGCGCTACCG GCTCTCGTGC
AGAATTTGTA CGGTCCACCG ATTCGAACAA CCACTCCAGT TAACAGTCAG CGCAGAGAGC
ACTGCTGCTG GCAACTCCTC GACACTGCAC GAGATCCCGA TTCCCTACAC CATGGGCATA
TGGGAGGCCA CGGAACATGT CGAAGTGGAG ATTGCGCTGA AAGGGAACAC TACACTTTCC
TTTGCCCGAG CCAACCAACA GTTTGGTTTC GCGTTGAAAG ACGTTGAGTT GCTTCCAGTT
TGATACAGCT ACTAGCAAAC AGTAACACTT AATACTATTA CTGCCAACAT GTTAATTACC
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| Protein sequence | MKLKDRIQQF EKAAGSNVRQ GLRVVHKGIR QGVQLAQKGV PHVNPPEVNP TRSSAVVEDP
EMPTTAAATD TLTAPTPTTA PPTTTTKLPS GVVPPSPDDG RYDFSFFQAW YDSLHATLSA
TNVLPTFESD QQTHPDPNVQ KFLLTLTTID AAWNGQKAAQ TLVDQLGKAK QPPTSPEELA
RAQKALQDAT QMVNDLLLTG EEAARVLLHT DSVLAHFVSS DYDDSNLMTL AVLQSATPKG
LAAWCDRGDA PTQQLFRLLR SADLMRVFLQ HGGPKNGAYG RAMELHEQLS AHQHTATIDP
DAHRIDPVLE RLALAVALEL CIDLTSFGTK HHIDPVQRYV HYEQAYLLGE LDPAFPTFTV
WELRNVVNSD VPDEQLGWGR QCLKNYRPDL VLTDDPQWRY CRIVKTDVAY KVPDWYKEPR
SMDQILSGGG KCGPRAWYGR FACKSFGIPT WGCKQPGHAA MTRWTTKGWM TCLGAGFPYS
YWENRGGLDF LLETQARAAF GTDRMYLQRV LRLEWLAIFY KESNKTIVDK CMPSSDSPWW
ALSMMQRKTV ARIPQSKPAR QSDNFKIVQT HIETVQAQPD SLETIHRDLT TGRITVPAVA
FGSSSRKADV MKSFLGGRQV FLKEDAVVAY VLNTDLISPL AERYRLSCRI CTVHRFEQPL
QLTVSAESTA AGNSSTLHEI PIPYTMGIWE ATEHVEVEIA LKGNTTLSFA RANQQFGFAL
KDVELLPV
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