Gene PHATRDRAFT_50513 details

Gene Information

• Locus tag: PHATRDRAFT_50513
• ID: 7199289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 275031
• End bp: 277300
• Gene Length: 2270 bp
• Protein Length: 532 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002185408
• Protein GI: 219130513

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 0.913729
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTTTGCTCAA TTCTCTTGCC TTCCCCATCC GCACTCCTTG TTGTTTTCTT CTTTGCGTGT 
TGGGTGACTG AGAACAACAA CCAAGAACTC TTGCTGCGTA GAAGCTGCTG ACAGTGCATA 
CGCTTTTGTA CGAGCAAGAG AGATAGAAAG CTAGAAAGGA AAAAAAATCG TGTCTTTACT 
CTAGAGAATT CTTCTCCTAC GCTGCGTCGA CCAAAAGCGT TCCGGTCCCA TCCTTTCCTT 
CCACGAGACC GTTCCTGTGT CCTGGACGAA AGTCGGCTTG TAAGCCCAGC GGTAAGGGGA 
CTCTCTCTCT ACCGCAATTG TACACTTTCA TCAACCGGAG GAAAGATTTG CACAATTGCG 
ACCAACTTTC GTTGTGAGAT TTGGCAGTCG CGAGTTTCGC TCCTCTGACG TTCCCTTAAC 
GTCGGCTCGT ATTTACGCTA CGCTACACAC CCCGCCGTGC CCTCCTTTCT AGTTCCCGGA 
CTCAGCCGAG ACGTCTTCCG AAAAAGTGTG CGTTTTGTTC ACGCCCTGCC CCGCAAAAAA 
TCGTGGTAGA AGCAAACGGT ACCAATGAGT TACATATTGG CGCTCGGTGC CGACAAAATC 
CGCCATCACA TGGTGGAAAA GCGGCATCAG AAAGAAGCGG CAGCTTCTGG TACGGCCGAC 
AAAGACCTAG CCTGGTGTCA CGAAGACTTG ATCAACCGAC TCAAACGCAA CGAAATGGAA 
ACATTGAGTC TCGGTTGGAA GGATTCCGAT TTCAGTTACC ATCGCAGTGC TCGTAAAGTT 
ACGGCATTGG AGAAGGCTCT GTTGGTGAAT ACCTCCGTCC GTCACGTTTC TTTGGGATGG 
CGTGTGCACC ATAAACGTCG AGAGATACTG GTGCGCATTC TCAAGGCCCT CTCTTCGAAA 
TCGCACAACG GAAAACTTCT CTCGTTACAG TTAGTCTTGG ATGATTGGAT CCCCGAAGCG 
ACTCTCAAGA ATCTTTTGTC CTCCCAACGT CATTTGGTCA CCATCGAGAT TGGAGCTGTG 
CAAGTCATGC GTCGCAATGC CGTGGGACAC GTATGCTGTG CCGCGGCGGC AGCTTCACAG 
CGAGCCGCCA CCGAAAGTGC CCGACTGTTT GTCGCCACTC ACTCTTCCTC GGTCGCCCCA 
AGCACGACTG TAGCCTCGGT GTCTCGGAAC AGTAACCTCG TCGTGCCATC CGGTGAGTAT 
GGGCCTATCG TGTCGCAATT CTGTTGCGAT CACAACGTGG CCAGTCGTAT CTTTGGAAAA 
GTCGACGTCA ACCATTACAT TACGAAACTC AAGTCACTTA GTTTGGAAGA TTGTAATTTG 
ACCGACGCAT CGGCCGAAGT GTTGGCTGAC GCCTTGCACT TGCGTGGGGG CATTGCCAAT 
CTCTCCTTGC GGAACAATCG ACACCTGGGC AAAAGGGGAT TGGCCTTGTT GTGTCAAGCT 
CCCGTGATGG ACAAGCTCGA TTTTGGTATT TGCGATTTGG ATACCGACGA GACCATCGCG 
GTGGCACACG CCATCGCCCG ACGTCCTTGG GTATTGGGCG AACTCGTTCT GGCCGGAAAT 
TATCGCATGG ACACGGACGG TCTGCTGGCA CTCGTCTCGA CCCAAACGTG TCGGAAACTA 
CGGGCACTCG ACGTGAGCTT TTGTGACGTG GGCGATCACC GCGCAACCGC TGTTTTGACG 
GCACTGCGGC AATTGAGTAC CCAAACGGCG CTCCATACCT TTATCATGCA AGGCGGTCGC 
ATAGTATGTG CGGAAGCGAC GCAAGCCCTG TGTGACTTAT TGTTGGAAAA TACACCGCTA 
CGGACCTTGC GCATCAATCA TCCCCGCTCG CCGCAATACG TGTCCACCGC CCAACTCAAC 
TTGATACTCA CCAGCTTACG CGAAAACTAC GAGCTCGAAC ATTTGGACGT GGATATTCGG 
GTAGAAACAG TCTCGGACAT TGACATTCAA CGCGAGATGG ACATATATTT TCGACTCAAC 
AAAGCCGGGC GTCGGATTTT GCGACCTAAC GAGTTTGTGG CAAGCTTACC GCCCCGCGCG 
GGCTCGAATA AAACATCCCA TAAGCCGGAT TGGTACACGG TGGTGGCCAA TGCCGGGACG 
GATTTGAATG TTGTGTACTG GATAGTCCGG CAGAGTGCCG ATTATTTTGC GTCGTGGCAG 
TAGACCACCC TAGTGTGTTG TCACTGCTCA TTGTAAGCCA GAAATTGTCT GTTGCCAAAC 
TGGAGAGGAA AAGTTACTTG GCAATGTATG TACTAAGTCA CACCGAGATG 

 

Protein sequence

MSYILALGAD KIRHHMVEKR HQKEAAASGT ADKDLAWCHE DLINRLKRNE METLSLGWKD 
SDFSYHRSAR KVTALEKALL VNTSVRHVSL GWRVHHKRRE ILVRILKALS SKSHNGKLLS 
LQLVLDDWIP EATLKNLLSS QRHLVTIEIG AVQVMRRNAV GHVCCAAAAA SQRAATESAR 
LFVATHSSSV APSTTVASVS RNSNLVVPSG EYGPIVSQFC CDHNVASRIF GKVDVNHYIT 
KLKSLSLEDC NLTDASAEVL ADALHLRGGI ANLSLRNNRH LGKRGLALLC QAPVMDKLDF 
GICDLDTDET IAVAHAIARR PWVLGELVLA GNYRMDTDGL LALVSTQTCR KLRALDVSFC 
DVGDHRATAV LTALRQLSTQ TALHTFIMQG GRIVCAEATQ ALCDLLLENT PLRTLRINHP 
RSPQYVSTAQ LNLILTSLRE NYELEHLDVD IRVETVSDID IQREMDIYFR LNKAGRRILR 
PNEFVASLPP RAGSNKTSHK PDWYTVVANA GTDLNVVYWI VRQSADYFAS WQ