Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50512 |
Symbol | |
ID | 7199238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | + |
Start bp | 273034 |
End bp | 274245 |
Gene Length | 1212 bp |
Protein Length | 372 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185407 |
Protein GI | 219130511 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATTCTGTC GTCACTACCA TATACGATTC CGATTTCGTT CACCCATAAC AGGTGCAATT GTTTTTCACT CGGCACCGTT TGTCTCGACC GCAATGTCTC CAGCAAACGA GAAAAAAGTG TCCATGGATG CACTCGCCAA ACTAGCACAA TCTCTCCAAA AGGAGATTGC CGATGCGGAG CCATCGCTCG AACGATGCCA AGATTTAATT TCTGCAACGG AAAAGGAAGG ATCAGCCGAA ATTATAACTA TTGAAGCGTT GGATCGAACG AAACTCGGCA AGATTGTTAC CAAGGCGGTC AAACACTTCC GTCGCGTGAA ACGGCACGGA AAGCAAGCAG ACTGGCAGTC GCTGCAGTCG CGGGGCGAAA CGTTACTCGA GCAGTGGAAG CAAGCAGTGG CAAAAGAGGA GAGCCAAGGC GAAGAAACTC CCAAAGCGAC GGGCGAAGCA GACGATGTCG CGTTGGATGG CAGTACGGGA TTGCCAACTT CGCAATCGGC ATACCGAGCT CGATTAACGA AGCAAAAGAA AGAACTCTAC AAAGATCCTC CAGAATTGCC TCCTCCACCG GTCAAGATTG AATCGGAGTA TTGCGGCCTA CCAAAGCGTG ACTCCAAGAC TGCTTCTTTA ACGTTCGAAT GTGGTAAAAC GAGCAAGCAT TTAGGGTCGT GGCTCCAAGA CTTTCATCCC AATCGCACTC CGGAAGAAAT TCTGCGGGCT GGCGCCTTTG GGGGTACCTA CTTTCGATCC ATCGCCTCCG CCGTAACGAA TCAAACGTAT TCATCGAATC AAGTATTAAA GGATACGGTC CCGGATGAAT GGATCGCAGG GCTAGACCGT AAGAGTATGC TGACGTCCGC GACATATCGG CAGAACGTGA ATAAATACGG TTCCAAATGT GGTGGATCAC TGGGAATGTG GGAAAGTAGT GGTTGGATTA CAGATGTTGA CCCGTACGGC TGGTTTCAAT GGTACTGTCG CTTTTACCAA GGCCGACGTA GCTCTGACGA CCAAAGACAA ATTTCACGAT GGTTAAAGAA CACGGGTCCG AAAGGTCGCT TTCGCTCGCA GCTGTGCAAC AAGATTTTAG CCGCCAATAC CCGTCACGAT GACACCAGTA TTAGTCCAGT GATTCGTCAG AATTTGTTAC ACTGGGGATT GGAGATTACG CCCGAAATAC TGGAGGCGCA CCGCAAACGG ACCGGCAAGT AA
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Protein sequence | MSPANEKKVS MDALAKLAQS LQKEIADAEP SLERCQDLIS ATEKEGSAEI ITIEALDRTK LGKIVTKAVK HFRRVKRHGK QADWQSLQSR GETLLEQWKQ AVAKEESQGE ETPKATGEAD DVALDGSTGL PTSQSAYRAR LTKQKKELYK DPPELPPPPV KIESEYCGLP KRDSKTASLT FECGKTSKHL GSWLQDFHPN RTPEEILRAG AFGGTYFRSI ASAVTNQTYS SNQVLKDTVP DEWIAGLDRK SMLTSATYRQ NVNKYGSKCG GSLGMWESSG WITDVDPYGW FQWYCRFYQG RRSSDDQRQI SRWLKNTGPK GRFRSQLCNK ILAANTRHDD TSISPVIRQN LLHWGLEITP EILEAHRKRT GK
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