Gene PHATRDRAFT_50499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50499 
Symbol 
ID7199284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp226109 
End bp227066 
Gene Length958 bp 
Protein Length142 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185451 
Protein GI219130603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.45795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTTAAGATA ACTCTGGTAA AGATATCTCG CAACGACCCG AACGTAAGTG CCTCTTCCAA 
GCGGTCCGAA CACGAACTCG AGAGGAGTGT AGGAAAAGCG TGCCAAAAAG CAGCCGCTTC
GGCGGTCTAG GCTTCGACGC GCGGACTCGA TGTGACTGTC GGAGGAGTGC CTCACTTCGC
ACCCAGATAT GACACGCATC CCGTGACACC CTTCGCAAGC AACGCATCGT AGGGAACGCC
CTGTCCCACT CGTCTTCAAC TAACAGTAAC CTTACTTGCG GGATCTTTCT ACTTTTCGTT
CACTGTCAGC ACCCAAAAGA TTAAATTAAT TCCACTACAC ACAGGAAGCA GCACCATGAC
GGTCCAAAAA AATCTCAGCT CTTCTTTGAT GGAGCTCGTC AACATTGACC ACGAAATGGA
TTGGAGCGAC TTTGACGAGG TCGTCAAGTT TCTCGAAGAG AACCTGTACA AAGTCATTGC
CGAAGTGCAC GGCTTTGACA AGCTCCTGGT GGATGATGGC AAAACCCAGC TTAACTGTCC
ACCCGCGGCG GAATCGGGTG ATTCGCACGG CAACCTTTTG TTACGCACCT TGAGCGAAAA
GGAAACCTCC AGCGGCTTGA CCCTCAAGCG AGAATTCAAA GTGCACGACT GCGGCGTCGA
TCCTGACAAT GAAGACAACC ACAAAGTAGA AATCCGGGAA GATGTCGTCA AGGCGCCGAC
CGAGTCCGGG CAACCCCCGG CCATGTCCGA GAACGTCGTG ACCGTCAGCA TCCCCCTAGC
GTAGAAAATT TGCCGAAATT GCCCTTTATT GATAAAGATG CGTCCGATAC AACGTTGGAA
GAATCTGTGC TTTGTCTGGG CTACACATAC ATCAAACAAA GCATATAGTA GAAGACCAAA
GTCGTGAAAT TGAAAGCATG CAAAATATAA GATACTTGAT AGCATACGTG ATGTAGTC
 
Protein sequence
MTVQKNLSSS LMELVNIDHE MDWSDFDEVV KFLEENLYKV IAEVHGFDKL LVDDGKTQLN 
CPPAAESGDS HGNLLLRTLS EKETSSGLTL KREFKVHDCG VDPDNEDNHK VEIREDVVKA
PTESGQPPAM SENVVTVSIP LA