Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_50499 |
Symbol | |
ID | 7199284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | - |
Start bp | 226109 |
End bp | 227066 |
Gene Length | 958 bp |
Protein Length | 142 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185451 |
Protein GI | 219130603 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.45795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATTTAAGATA ACTCTGGTAA AGATATCTCG CAACGACCCG AACGTAAGTG CCTCTTCCAA GCGGTCCGAA CACGAACTCG AGAGGAGTGT AGGAAAAGCG TGCCAAAAAG CAGCCGCTTC GGCGGTCTAG GCTTCGACGC GCGGACTCGA TGTGACTGTC GGAGGAGTGC CTCACTTCGC ACCCAGATAT GACACGCATC CCGTGACACC CTTCGCAAGC AACGCATCGT AGGGAACGCC CTGTCCCACT CGTCTTCAAC TAACAGTAAC CTTACTTGCG GGATCTTTCT ACTTTTCGTT CACTGTCAGC ACCCAAAAGA TTAAATTAAT TCCACTACAC ACAGGAAGCA GCACCATGAC GGTCCAAAAA AATCTCAGCT CTTCTTTGAT GGAGCTCGTC AACATTGACC ACGAAATGGA TTGGAGCGAC TTTGACGAGG TCGTCAAGTT TCTCGAAGAG AACCTGTACA AAGTCATTGC CGAAGTGCAC GGCTTTGACA AGCTCCTGGT GGATGATGGC AAAACCCAGC TTAACTGTCC ACCCGCGGCG GAATCGGGTG ATTCGCACGG CAACCTTTTG TTACGCACCT TGAGCGAAAA GGAAACCTCC AGCGGCTTGA CCCTCAAGCG AGAATTCAAA GTGCACGACT GCGGCGTCGA TCCTGACAAT GAAGACAACC ACAAAGTAGA AATCCGGGAA GATGTCGTCA AGGCGCCGAC CGAGTCCGGG CAACCCCCGG CCATGTCCGA GAACGTCGTG ACCGTCAGCA TCCCCCTAGC GTAGAAAATT TGCCGAAATT GCCCTTTATT GATAAAGATG CGTCCGATAC AACGTTGGAA GAATCTGTGC TTTGTCTGGG CTACACATAC ATCAAACAAA GCATATAGTA GAAGACCAAA GTCGTGAAAT TGAAAGCATG CAAAATATAA GATACTTGAT AGCATACGTG ATGTAGTC
|
Protein sequence | MTVQKNLSSS LMELVNIDHE MDWSDFDEVV KFLEENLYKV IAEVHGFDKL LVDDGKTQLN CPPAAESGDS HGNLLLRTLS EKETSSGLTL KREFKVHDCG VDPDNEDNHK VEIREDVVKA PTESGQPPAM SENVVTVSIP LA
|
| |