| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50493 |
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| Symbol | |
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| ID | 7199281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | - |
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| Start bp | 204946 |
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| End bp | 209022 |
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| Gene Length | 4077 bp |
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| Protein Length | 1358 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185446 |
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| Protein GI | 219130592 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGG GACACGCAAA GGCCCCTCGT GCCAATCCAG CCTGGCCCGC GGATTCCAAC
GGCGCAACTG TCGTGAAGTC GACGACGACA ACAACGACCA ACACCCCTCC TCCATCGGTC
ACCGAAGGAA CGCCCCGGAA GAAGGCAACG ACGAATAAGC TCCCCCGCCG GACCGACACG
GCCGACGCCC CGACTCCGGC CTCGTCGTCC GCCACCCCAG CGACTCTGGA ACCCACCACC
AACGGCCACA GCCACCACGG AACTGCGGCA ACCAACGCGA ACGGAAACAA CGCCACCAAA
CCCAGCCGGA AGCGAAACTC GTCCCTCAGT GGTTCCAAAA CCTACCTACA GATCATTCAC
GAAGCCATCC TCGCTCTCGG TGATCGCACC GGCTCCTCCA TTCCGGCCTT GACCAAATGG
ATCCTTCAAG AATACCCGCA ACTCGACGGG CCACAGTTTA AAAATAGAAT CCTGCAAGCC
GTCAAGTCGG GAACCAAAGC CGAGCGCTTC CAAAAGGTCA AATGCAGTTA CAAAATTGCC
GCCGTCTTTA AAGAAAAGGA ACGCCAAGCC GCCCGCAAGA AAAAGAACGC CGTTGCCGCC
GCGGCCGCTG CCGCCGCCAA GAAGAAAAAG AAAGCCGCCA CGCCCCCCAC CCTCGCACAG
ACGCAGGCCG CTCACGAACA AAAACTGGCC CAGCTACAGA AATCCTTGTC CCCCGAAGCC
CTCGCCCGCA AAAAGGTTGA TCTCGCCCGT CAGGAAGAAG CCACGCGACA ACGACTCCAA
GCCGAAAAGG TTGCCAAAGA ACGCGCCGAT CGTCTCCGCC GACGGCGCTT TCCCATGGAG
GATACCCGCT TGCATCAGGA AGACGCCGAA TTGCACGTCA AACCACCGGC GGATGTCTTG
GCTCGACCGT ATTTGCCCTA CTTTTGGTAT ATGACGACTG ATCTACACGA TCCATCCCGC
CACGGCAAAA CATCCTCGCA AATTTTACAA GCGTCCAAAG TAGACGGACT CGACACGGGG
AATCACGGTT TGGTGCCGGA TTTGTTGGGC GTCTACCACT TTTTTCGAGG GGATGTACAA
TTTAGGATTC CGGACGAACG GGAGCTCGTG CCCCCATTTT CGCTGGCGCA ACTCGTGTTT
GCGACGGAAC AGATTCTGAA CGGTAACGCC AAGCGATCGC GCATCGTTCC ACCCTTACTG
AGTTCCTTAT TTTGCACTTG CTTGCAAATT TTGTGTAGAG CTCCGGAAGA CACTGCCGAA
AAAACGTCAC AAACGCAACT CCAAAAGGAC CTGCACCGGT ACCTGGCTCC CGCGCTGACT
CCGGCGAGCT GGGCCGACGT ACTCTACCTG TACATGGACG CCATGGAAAG ATTTTACGCG
ACGGATGCTT CACGAGACCC GAACGTTTTG CCACCGCTGC AGATTGACGT CGAATACTTG
TTGGCCGTCC GCGACGACAT TGTCGTGCCC ATGACACCGG CGACGACCGT AAAGGGCAAA
AGTAGTGAAA CGAATTTGAA TCCTTTGCCC GGCGGTTACT TTGCATATCT GGGGGACCCG
CGCGGAATCT TGTTTCGAGC CTTTAGCAAA CTGGGTCGAC AGGATCCTTG GTTGTTGACG
GCGGAAGAAT TGATAGTCCT GCTACGGGTT CTGACAGATG ATATCCTGGC GTCCCACCCT
GCCATTAGCC AAGACGTGGC CGCTCGGGAG GAAGAAATGC TCGCGTTGTC CAAGGCGAAG
CGTGCGGCGG ATACTAAACT TCGCAAAGTA CGGCTGGCCT TTGAAGGCCC CAAGAAACCG
GCGACTGCTA CTGTGAAAAA GCCGGAAGAA AACAAGGAAG TGACCAAGGA CGAAAAGACG
TCCGAGACGG AGAATCAGAA CGGCAACGAA GACGAGAAAG AAGAAATTCT GTTCAAGCCG
ACGGCTACGC AGAAGCAATT GGAATCGGCT GTGAAAGCCC AGCAAAAAGC GAGCGAAGCT
TACGAAAAGG GTATTCGCAA ACTGACGGCA CGAACGGAGC CCATAGGTTA TGACCGCAAT
TTCAACGCTA TCTATTGCTT TCGACACGAT CCTGAGGTCT TGTACGTGGA AGATTTACGA
CAGCCTTCAA CTGTAGCGAA CCATTTGCCA CTTGACATGC AATTTAAGCG TCGTTCATGG
CACTTGATTG AGACTACAGC CTTGTTTGAC TCATTTACGG GGAGTCTAGA CATTCGAGGA
AGAAGAGAGC ATGACTTGTA CGAAGAACTC GTTGGCCCAC AGGGAGCTCA GCAGTCGCTT
CGTCGTTTCT TGCATGACAA TATGAAAGAG CAAAATGAAG CAGTCGCACG AGTGCGAGAA
CTGGAATCGC TGAAAAAACG ACTGGAGGTG GCTAGAGTCA AGTGCGACGA AGAACAAGGG
CGTAGAAGCG GGCGTTTGGC AGGACAGGCG GGAGAAGAGC TGAGCTCTCT CGAGTTCCAA
ATTGAGATTC TCGAAAGCAG GATTAACGGC ACGTCAGCAC CAGAGCCGCG TGATTACGAG
GAGTTGACAG GTTTGACTCT GCTTCGCAAA TTTGATTCAA ACAGTGGCAT GGGAGCTCGT
CGAACCCGTG AGCAGAAACA GCAAACCAAG ACCCACAACC TGCCGATTTT ACCTTGCAGC
AAGATGTGCG GCACCGGCAA TATTGACGGT ACAGGATTGG TTGGCCTTTT GGTATCGGGA
CTACTAGAGG TCGAGGAAAT TTGCGAAACT CTTGCCCCAT GGGAGCGCAC AGACACAACG
CGAGGCGAGT GGGTAGCTCG TTTGGAGAAT GCTGTTCATA CATGGAATGC TGTCAGTCCC
ATGGTCCTTG GTTTAGCGGA TGCGCCGCCG ATGAAAGTTA TTGGCTCACC GGCTCAGTCC
AGCCCTCCAA ACGGGTCTTC GGGTGTACAA CGTAGCGCCA GACGCACATC TCTCGATAGC
TTGGAGTCGG CTTCGAAGAA ACGCAAGGTT GAGACTCCTC CTCCAACGTC AACGACTTTT
CATTCTGCTG CCAATATAGT TTCGATGATT CGCCAACCTC TGATTGATCT TGAAGCCCGT
GTAGCGGCCA TAACAAATCT AGACGTGGCG AGCAAAGATG CGGATATCGC CGACGATAAC
TTGTCAACGG ATGGGTCAGA AGACGATCAA GCCATCAAGG AAAAACTAGA GCGCGCTTGG
AAAAGGCAAA TACACCGTCT ACGCAATACA CTGACCCACC GTTACGGTCA AATTCGTGAA
TTCTTAGTTG CTGCGATTGC GGCAGCTCGC AAGGCCCATG TGCCAGAAGT AGTAGCCGAG
CTCCGGGCGG CTCTCTTACA ATATCATCCT GGAGCCGCTT CCGAGTGCAA GTATGCAGCA
ATCAAGGTCT TGCTCGCACA CGGCGATTAC GAGCCCGACG AAGACGAGGA AGAAGAAGAG
CAATATGACG TCAGGGAGGA AGGAGACGAA GTGGAGATTC CATCGGTGAT TTGCGCAGAA
GCTGCGATGC TCGCTAGCAG CCTAGATGGG TCCGAGGACG CCACGCGAGC GGATTGGATA
GATTCCGTCA AGGCGTGCAA GACAATCTCG CGGTTAGCTT CATTGGTCGG GGCCTTTGTC
AAGAATGCGC AAGATAAGAT GGGAAAGCTA GAAGACGAAC GGGACGACTT GTTGGCGGCT
ATTAAGACAT GGGAGAAGGA GGAAGAACGC CGAGTCAAAA ATCGCGGCGG CAAAAAGCCA
GTCGGTCGAC CCACAAAAGA TAGTGTTGGA CCCTCGGAAG TGTGGGCCAA CGTGCGTTTC
TCGGACGAGA TTTGTATGGC CAAGGCGGAA AACTGGCCTT GGTGGCCAGC TCGCAAGTGT
ACGCCAAAGG ACGGTTCTTT GGCTCGATCT TTGGCCGGTC TTGATCGCTC TTTGGTTGCG
CTTATCGGTG AAATGGGAGG ACTCCGGGTG GTTAAAACTG AGAGTATTAA GGCTTTCTCG
GGAACGCTGG TGGAGGACGA GGACCTTGGG CAGTACAACA AGAGCGTTCG ATCGCAGTTG
GATGATTGTA TGGCCATGGG TCGTCGTATT GCGCGCGGGA TGGAAAAGAA GCGATAG
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| Protein sequence | MKSGHAKAPR ANPAWPADSN GATVVKSTTT TTTNTPPPSV TEGTPRKKAT TNKLPRRTDT
ADAPTPASSS ATPATLEPTT NGHSHHGTAA TNANGNNATK PSRKRNSSLS GSKTYLQIIH
EAILALGDRT GSSIPALTKW ILQEYPQLDG PQFKNRILQA VKSGTKAERF QKVKCSYKIA
AVFKEKERQA ARKKKNAVAA AAAAAAKKKK KAATPPTLAQ TQAAHEQKLA QLQKSLSPEA
LARKKVDLAR QEEATRQRLQ AEKVAKERAD RLRRRRFPME DTRLHQEDAE LHVKPPADVL
ARPYLPYFWY MTTDLHDPSR HGKTSSQILQ ASKVDGLDTG NHGLVPDLLG VYHFFRGDVQ
FRIPDERELV PPFSLAQLVF ATEQILNGNA KRSRIVPPLL SSLFCTCLQI LCRAPEDTAE
KTSQTQLQKD LHRYLAPALT PASWADVLYL YMDAMERFYA TDASRDPNVL PPLQIDVEYL
LAVRDDIVVP MTPATTVKGK SSETNLNPLP GGYFAYLGDP RGILFRAFSK LGRQDPWLLT
AEELIVLLRV LTDDILASHP AISQDVAARE EEMLALSKAK RAADTKLRKV RLAFEGPKKP
ATATVKKPEE NKEVTKDEKT SETENQNGNE DEKEEILFKP TATQKQLESA VKAQQKASEA
YEKGIRKLTA RTEPIGYDRN FNAIYCFRHD PEVLYVEDLR QPSTVANHLP LDMQFKRRSW
HLIETTALFD SFTGSLDIRG RREHDLYEEL VGPQGAQQSL RRFLHDNMKE QNEAVARVRE
LESLKKRLEV ARVKCDEEQG RRSGRLAGQA GEELSSLEFQ IEILESRING TSAPEPRDYE
ELTGLTLLRK FDSNSGMGAR RTREQKQQTK THNLPILPCS KMCGTGNIDG TGLVGLLVSG
LLEVEEICET LAPWERTDTT RGEWVARLEN AVHTWNAVSP MVLGLADAPP MKVIGSPAQS
SPPNGSSGVQ RSARRTSLDS LESASKKRKV ETPPPTSTTF HSAANIVSMI RQPLIDLEAR
VAAITNLDVA SKDADIADDN LSTDGSEDDQ AIKEKLERAW KRQIHRLRNT LTHRYGQIRE
FLVAAIAAAR KAHVPEVVAE LRAALLQYHP GAASECKYAA IKVLLAHGDY EPDEDEEEEE
QYDVREEGDE VEIPSVICAE AAMLASSLDG SEDATRADWI DSVKACKTIS RLASLVGAFV
KNAQDKMGKL EDERDDLLAA IKTWEKEEER RVKNRGGKKP VGRPTKDSVG PSEVWANVRF
SDEICMAKAE NWPWWPARKC TPKDGSLARS LAGLDRSLVA LIGEMGGLRV VKTESIKAFS
GTLVEDEDLG QYNKSVRSQL DDCMAMGRRI ARGMEKKR
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