Gene PHATRDRAFT_50486 details

Gene Information

• Locus tag: PHATRDRAFT_50486
• ID: 7199277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 193553
• End bp: 194378
• Gene Length: 826 bp
• Protein Length: 173 aa
• GC content: 44%
• Product: predicted protein
• Protein accession: XP_002185396
• Protein GI: 219130488

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCACGAGTTT TTCCTCAGTC TGCTCCTTAC GCATTTCACA AATTGCGTCA GTCAGGTCAT 
TGACTGTCAG ATCCACAACA TTTCCCCACA GGCAGTGAAG AACCATATTC TTCTCACTAC 
TACAATGAGT CCGCGAGAAA GACAAGATGT AGAGCTGCTC AAGGCAAGCG AGAGCACGGA 
ATCACTACCT GCCCTTGAAA AGACGCCGAT AAAAACTGTA CAATTTGGTG CGATTGAAAT 
TCGCGAATAC AATCGCATAG TCGGAGATCA TCCGGACGTT AAAGTGGGAC CACCCGTGAG 
TTTAGGATGG GAGTACAATG TACGGGAACC TGTTGATATC AACGAGTATG AGGCCACCCG 
TCCGTCTCGG AAAGTCTACT TACGTATGTC TTCGATCACT CGAAAGAACA TGCTCCACAA 
TGTATTCGGC ATTGATGAAG AAGAAATTGC CTCTTCGGAA AAGGAAGTTC AGCGTATAAA 
GAAGCAACGT GAAGCATCCA ACAAGCAAAG CAAAACTGGT GAAAAAGTCG AATCTGCCTT 
TCAGTCTATG AAAAGAAAAT TCCGACGGAA GATATCGAGT GAGAACCTGT TTCGTGGAAT 
AGCTTCCGCG TCGGGCAGTA TGATCGCCGT GGGGATGCAC GCATAGACGA GACAACAAGG 
GTTAAAAATG TACAAAGATA GACGTATGCT TTTGTTATAA TAGAGATCCT TTAAAAGATC 
GTGCTCTATC CACTATTTTT TCATGCGGTA CATGAATAGC AGCCTTCGCG ATCATTCCGT 
TGTTTCATTC CTGTAAATAG AAAAATGAAT GCGGTGGAGT GCTTTC 

 

Protein sequence

MSPRERQDVE LLKASESTES LPALEKTPIK TVQFGAIEIR EYNRIVGDHP DVKVGPPVSL 
GWEYNVREPV DINEYEATRP SRKVYLRMSS ITRKNMLHNV FGIDEEEIAS SEKEVQRIKK 
QREASNKQSK TGEKVESAFQ SMKRKFRRKI SSENLFRGIA SASGSMIAVG MHA