Gene PHATRDRAFT_50485 details

Gene Information

• Locus tag: PHATRDRAFT_50485
• ID: 7199324
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 191030
• End bp: 193289
• Gene Length: 2260 bp
• Protein Length: 530 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002185395
• Protein GI: 219130486

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.517757
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCTGGCAGT GAGTGTTCAC TGCATGCACC TCCTGACTTC TCCGGGGGAA GCAGGAAACA 
TATTTCGTCA GCAGCTTATA TTTACAAAAC TGCTTCGCTC TACCTCTTTG TGGTTCATTG 
AGTAGTGAGA GTTGCTACGG CAGAAAACTG TTCCGCACAG CACCGTTCCT TGTGCTAGTC 
CGTTCCCTAG CGCGGTTCAA CTTTCCTGAC AACCGTATAT TTCTTGGAAA GAACGGTCAC 
ATTTCTGAAC CCTTCGACTG TTGGAAGGCC GGAGTTTCCG GCTGCAAATG CATTGAGCAT 
CTCGTCAATG GATTCTGACA ACGTATTAAC AGCTGATGCT ATTGGGGACG GAGAGGAAGA 
TTTCCTGTTG CGGAACCGCC TGCTTTCGAG TAGCAACACC AGTATGGCAA GCCCACCATT 
GCACTCGGGA GGTGGAACTG ACCATGAGAG TTGCGGGGCT ACTTGCAGCA CTCCAATCAT 
GCCAACACCG ACTAGTGTAT CACCCTCAAC GCCGTCAATA GCAGCGACAC GCCGGAGCCA 
AGGATTCGGT AGAATCCTTT CCTTTCCAGG TCCAATCCTT TACAATATTC AAAGCAGATG 
TACTCGACTT ACTGCCGGAA TCCTTCAGAA CCCAATATCT GGAAAGGGTG GACCTAGCGG 
GTGGTTTCTC CTGCTGACGA TAAGTGCCTG GTTCGGCTTG GGCGTTGTGG CGATCGTAAC 
CACAAAACTC CTTTTAACGA GTTGGAAGGT TCCTCCTCTG TTGTTGACAT TCCAACAACT 
GACTGCAGCA TCAACATTGC TACGAGTCGT GTTGGGTTTG CAACAGAACC TTCAGCCGCT 
GCCATGGGAA AACTATTGTC GCGCCACCAT AGCACCTGAT GCTCCATCTG GTACGGGAGC 
ATCGACTCTG GATGCGACGG GTACCGAGGA ACACTCGATT GTTGAGCTGG GAGCCGATCA 
AAATCACTCT GCCGTGGAGG ACCGAATCCA GACGCATATT TCTAAATTTC ACAGCCCCAA 
TAACTCACCG TGGAATGTGG AAAATACGGA ATTTTTTCTG ATTGGACTGT TCAACGCATT 
GGACTTCTTG GCTTCGAACA CCGCATTCTC TTCATCAGCT GCTTCATTCG TGGAGACAAT 
CAAAGCGAGC GACCCCATTA CTACTACGGC TGTTGCCTTG ATTTGGAAAA TTGATCAGGT 
CAAACGGCCG GAAGCGATTT CCTTAATGGT ACTCATAATC GGTGTCCTGC TTTCTACAAT 
AGGAAATGCC ACAAGCTCCA ACACTACTGG CGAGGATCCA CTTTCTAGTT CGGAGCTGTC 
CGTAGACGAG ACTGACGATG ACAGTGCTGC CGAAGCGCAA GAAGCTTTGT ACCTGTCCAT 
CCGCACCGCC ATTACTGTGG TCACAGCCAA TTTGTGTTTC GCCTTTCGGG CCATGAATCA 
GAAATTGTAC CGCAGGCATA CAAGCACGGG AGACCAGCTG GACGATGCGA ATTTGTTGTG 
TCGGTTACAA CAGACTGGAG CCTTGAGTTT GCTGTTCCCC ACAATGCTCC TGTACGCAGG 
ATTTGTGTTT GACGCTCTTT GGCAAACGCC GAGAGAAATT GTGTTGCAGT ACGTTGGGTT 
GGCGGCAGTC AATGCGGGTG CATTTGTTGC CTACAAGTAA GTTTGCATCT GTAATGGAGG 
GGATTATGTA CGTCGTGACG TAAGCTCATG CGCGCTTTCT GGTTTTCATT TTCATTTTAG 
CCTTGCAGCA TGTTATGTTT TGAGCAACCT TACGGTTTTA CACTATTCAG GACTTGGTTG 
CATGCGCCGC ATGTTTGCTA TTTTGTCCAC TAGCATTTTT TTCGGCGTCC CCATTTCAAT 
TTTGGGAGCT GCGGGCATCG TGTTGTGCCT CGCTGGTTTC CTATCCTTTA CGTACACACG 
TTCCCAACGT ACAGCAAACA AAGCTATCTT GAAAAGTTTC GATCACAAGG ATTCCAATGT 
ATAAAGCAAT GCGACTTGAG TTTTCTATAC CGGACAGTCC ATTCCAAGTT CCTGCCTTGA 
ACCCCGCGTC ACAGTTTTGG CTTGCAGTGC CGAACCGAAA GCAAGCGTTA AACCAAAATT 
GGAGTGCTCT GTTGGAAAAC AAAGTTGCAC GGGTCAAGTT ATGTCCGTTC TTGGCCAAAA 
CGTAGGTATT CCGCTATGTG ATTTACTGTA AGGCAGTTGA GTACTGCAGC GGTCTGTATA 
GACATGCAGG GTTCAACATA ACTTTTAAAC TTATGCTAGG 

 

Protein sequence

MDSDNVLTAD AIGDGEEDFL LRNRLLSSSN TSMASPPLHS GGGTDHESCG ATCSTPIMPT 
PTSVSPSTPS IAATRRSQGF GRILSFPGPI LYNIQSRCTR LTAGILQNPI SGKGGPSGWF 
LLLTISAWFG LGVVAIVTTK LLLTSWKVPP LLLTFQQLTA ASTLLRVVLG LQQNLQPLPW 
ENYCRATIAP DAPSGTGAST LDATGTEEHS IVELGADQNH SAVEDRIQTH ISKFHSPNNS 
PWNVENTEFF LIGLFNALDF LASNTAFSSS AASFVETIKA SDPITTTAVA LIWKIDQVKR 
PEAISLMVLI IGVLLSTIGN ATSSNTTGED PLSSSELSVD ETDDDSAAEA QEALYLSIRT 
AITVVTANLC FAFRAMNQKL YRRHTSTGDQ LDDANLLCRL QQTGALSLLF PTMLLYAGFV 
FDALWQTPRE IVLQYVGLAA VNAGAFVAYN LAACYVLSNL TVLHYSGLGC MRRMFAILST 
SIFFGVPISI LGAAGIVLCL AGFLSFTYTR SQRTANKAIL KSFDHKDSNV