| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50482 |
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| Symbol | |
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| ID | 7199322 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011698 |
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| Strand | - |
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| Start bp | 180208 |
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| End bp | 184144 |
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| Gene Length | 3937 bp |
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| Protein Length | 1188 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185442 |
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| Protein GI | 219130584 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCATCGA GGAGTAGATT TAACTGTCTG CAGCTTCACT AACCTTTATT GCACACCGCT
TTGAGGCTCG TGTGCATATT GGAGGACATT TGCGAAATAA GTTTGCGGTA AGATAAAGAA
ATCGTCCAAG CTTTTGGATT ACCATATTTC AACACCGATC GTCCTTTGGC TAACTTCATC
TTCTACACGT TTACTACGGT AGCTCACGTT GAACTTTAGT TTTCTGACAG AGTTGGCCGG
TAAAAAAGGA TATTTGTAAT TACAAACAGA TTCAGCCCCT CTCTTCTTAA CTACTTTTCC
TAATTCGCTC AAAATGGATC CTGAAGAGCA AAAGATAAGC CGAGGCATTT TGCTATCCGA
AACTAGGGGT ATCTCTAACG AATACGGTGG CGATAGCACT CGCGAGGACC TCGCTAGAAT
CGACTCCAGC TCACCAGCGA CAGAGACACC GCCCGCCAAG AAGCCGAAGC GCGAATCTCC
GTGCCCTGAA AGTAACGGCA TCGCCAACGC CGAGAGCAGC TCCAAACCAA GCAGTACAGT
AGGCAACGAT GCTGCACCTA GCGTTGACTT TCCGCCAGAA GCAGGAGGTA CTCAGCCGGA
TTCTCAAGGT CGAGATGAGA TTGTTAGCTT GTATATTTCT CTCGAGCCAA TCTCCACAAA
AGTGCCACAA ATTCCAAAAT TGACCGAGTT TGAGGTCAAA CAACTGGAAG CAGTCTTAGA
GTTCAAGAAT AGTTCAGAGT GGCGAGATGA TTGGATGGGT AACCTCGCCT TTGCCGATCT
AGACGTGGGC AACCCAGCTA TTAGTAGTAA ATCACGGGAC AAACAACATA CTTTCCGCCA
GCCTTTGATC CAATGGGCGC ACAATGATCA ATCGAACGCC AAATACGTGT GGTTTTTGAT
TTGCCATGTC TATAACATTC CAAGTATTCC TCCGGCAGCC AGAAAAATTC TTGGGGCCGT
GGATTTACGC TCCTCTGTTA ACATGGAAAA AACTTTACGG CGTGTTATGT ATGATCCCGA
AGTCTTGCGC GAAGATGGTT GGACTACCGC CAAGTCAAAT GAGTACATAG GGGCGACCGG
TGGCCCACAC AACATTGGAG AGCAGATCTA TTGGGATGGT AGCAATGCCG TCGTAATTGC
CTACATTCAT GACCCAGGTA AGACCAAGGC AAAAAAGAAT GACAGAATTT AAATCAAGGT
ATTCTCAACT CAAGGATTGC GCGTTTCAGA TATTGGCGAC CTTTGGAAAG CCATTTGGGC
TGGCAACGAC GACGACGATG ATGTACTCAC GACCACCTTT GATCTCGAAG CTGAAGAGCT
ACTAGAAGCG AAGCGAAAAT GGCAACGACG GCAAAGCTCA AGATCTGGAG GAGGTTTATC
GAGCTCACGA CACCCGAAGA AGTCGAACGT AAGCGACGAT TTCAACGTTG CCGGGGTCGA
ATTGGGGATA GTTCTTGGAG CGAGTTACAG TAAAGGTGCC CGAAACGGCG TTTACTGGCC
GGCCCGTGTT ATGCACGCCT CTGAAAAGAT GGGCACGAAA TCTCAAACAA AAAGGCAAAG
TAGCAAAAAC AAGATCGATC TTGTCTTCCT TGCCCCCTAC TGGAATTCAC TTGAGCAGTC
TTTCGCGGCT AGGAAAGTGG AGGCGCTATC TGAAAATCGG AAATCATCGT TTCATTCGAA
TCCTTTGTTT CAATTTGAAA CTGTTGAAGC CACTGACGAT ATGATTAAGG AGTATCTTTA
TCGCCCCGAG TGTGAATTGG ATTTGCAACA GCTTCGCCTT TCGTTCCGAT TCACCGGTTT
ACCTAAGGGA GCATTCTCTC GTTTCGTGGA TGCTCATCGT CTCGCTCTAG GCTTGCAGAA
TTACGCCGTT CGGCATTTGA AGAAAAACGT ATCCGCCACT GATCGTGCTA CTGCTGGATT
GTTCGAGGCC CACCCACTAG CGGTGAGAGC GCCGATATAT CCTTCAATCG TCCTTGAGCT
TCCCTTCGCA TTTATCCTTT CGCAGTTACC AACTCTTTCG AGCCAGTCTG GTTTTGAGCA
CGAAAGACAC GAACCTGTGT TGGAACTGAA GACGATTGTC GACTCTATGA AGCCACCATC
ATGCTGGGGT AAGAACATCA TCGCAGCACT CCCTACGTCA GCAGACGAGG GTCGAAACAT
TCACGAGGGA ACCGGCGATA TCACTCCATG GAAGATTACT ACTATGTCTA ACGGGAAAAG
TTCGAAGAAT AGAGAGTATG AAATCGGGCA TTTTCTTTCA GGTTTGTTAG CTCTTCAGCA
GGCGTTTGAT GATCATACTT CATCGCCTGC AGTTCTTGGA GTCATACACG AGTTCGACAA
CCTTTTGGTA TTAGTGTCAC AGAAAAATAT TACAACCGCT GGAACTGAGT CTGAGCGCAC
TTCCCGGCTT AAAGATTTGG TAAGAAACTG GGCCATCTTA AAAGGGCATG GGGAAGAAGG
GCTGTCGATT GAGAAATCAA GCGGGGAAAG TTTAGTTGTC TCAGAGTGGC ACAGAGCAAC
TGAGCGTCTT TTCAAGTATA TTGTGGAATC TTTCTCTGCA AGCATTAGTC GACGAGGAAT
CTCGACTGTC TTTACCGACA CACGGTGCAA TGGGCACATT ACGTCAAACG ATTGCTTCGA
ACGTGCAGTG AGACTTCCGG CGGCTTTGAA AGGTGCAAAA CTTGCGGGCG CTGGAAGTGA
TGAAAACTGT CGACTTATCT CAGCAGTCGA CGAATCCTAC CTGAAGTATG TCGAACATAC
ACTTTTACCG AAAGCTCACG ACAGTGCATA CCTGAAACGT ATGCGCGGAC GATGCGCAGC
AGCGGTGAAT GAGACTGAAA TTCTTGTACT CACCGAAGAT TCGGAAGGCA ATGGAGGCAG
TGACACTCAC GGATCAAAAG GAACATGGGC GGCAGCGGTT ACAGCGGTGG CAGCGGCCGT
CGCTGCAGCG GATATGATAG TAGGTGGAGA GTCAACAAAC GCTTTCTGCG CTACGCGACC
CCCAGGGCAT CACGCAGGTA AGGGTCTGCA TCCTATGAAA GCAGTCTCCA ATGGCTTTTG
CGTTTTGAAT GCTGTTGCCT GTGCAGCTAT CCATGCGACT TCCTCAATAT TGGAAGGGGG
CCTCGGACTC AAGAGAGTGT GCATTATAGA TTTCGACGTG CACCATGGAA ACGGCACTCA
GGATATTCTC TGCTCGACTT TCAACCCACA TTTTCTCTAC GTCTCGATTC ATGCGGGAGG
TCCGCATGTA AATGGAGTAG CTATTGACGA CGATCCAGAT CATGAGCTAC ATGAACTAGC
AAGTAACCCA AAACAAGGCG GTGGCATTTA TCCGGGTCGC TGCGGTGACA CCTCTCCCCA
CAAAGGAGTA TTGAATATTC CGTTAGGCTC TAAAGTTACT GCCCATGCCG TAGGGGCAGC
TTTGTTGAGC ACTGTAACTC CTGCTGTCAA CAAATTCACA CCGGACCTCA TTATTCTATC
CGCCGGCTTC GATGCACACA AAAGTGATCC AATGTGCTTG GGAAGTTTAA ACGCTGAAGA
TTTTGGCCAC ATCACCGAGG TTTGCTGTCA ACTTGCATAC AAATCCTGCA GTGGTCGAGT
ATTAAGCGTA CTGGAGGGAG GCTACGGTGT TCCCTGCTGC CGACCACAGA AGAATGTATT
TATTCCTTCT CCCGGTCGAG GCGACCGGGA AATCGAGTCG ATTTCTCAAA AGCAAAAGGA
CGGACCTGAA TTGCCTCCAT CCACTCCGAG TGCTTTACAA ATACCCCGTC CACAGCCATC
GAGGTTATTG CAGTTGGGAG ATGACTTACC GGAATCAATG GACGATCAGG TTCCATTCGC
TCTACAGCGT CGGCTCGAGA AGTGCCATGC CGAGGGTTTC GTCGAATGCG TCAAGGAGCA
TGTCGCCTCG TTAATGCGAT GCAACAAACG CACGTAG
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| Protein sequence | MDPEEQKISR GILLSETRGI SNEYGGDSTR EDLARIDSSS PATETPPAKK PKRESPCPES
NGIANAESSS KPSSTVGNDA APSVDFPPEA GGTQPDSQGR DEIVSLYISL EPISTKVPQI
PKLTEFEVKQ LEAVLEFKNS SEWRDDWMGN LAFADLDVGN PAISSKSRDK QHTFRQPLIQ
WAHNDQSNAK YVWFLICHVY NIPSIPPAAR KILGAVDLRS SVNMEKTLRR VMYDPEVLRE
DGWTTAKSNE YIGATGGPHN IGEQIYWDGS NAVVIAYIHD PGLRVSDIGD LWKAIWAGND
DDDDVLTTTF DLEAEELLEA KRKWQRRQSS RSGGGLSSSR HPKKSNVSDD FNVAGVELGI
VLGASYSKGA RNGVYWPARV MHASEKMGTK SQTKRQSSKN KIDLVFLAPY WNSLEQSFAA
RKVEALSENR KSSFHSNPLF QFETVEATDD MIKEYLYRPE CELDLQQLRL SFRFTGLPKG
AFSRFVDAHR LALGLQNYAV RHLKKNVSAT DRATAGLFEA HPLAVRAPIY PSIVLELPFA
FILSQLPTLS SQSGFEHERH EPVLELKTIV DSMKPPSCWG KNIIAALPTS ADEGRNIHEG
TGDITPWKIT TMSNGKSSKN REYEIGHFLS GLLALQQAFD DHTSSPAVLG VIHEFDNLLV
LVSQKNITTA GTESERTSRL KDLVRNWAIL KGHGEEGLSI EKSSGESLVV SEWHRATERL
FKYIVESFSA SISRRGISTV FTDTRCNGHI TSNDCFERAV RLPAALKGAK LAGAGSDENC
RLISAVDESY LKYVEHTLLP KAHDSAYLKR MRGRCAAAVN ETEILVLTED SEGNGGSDTH
GSKGTWAAAV TAVAAAVAAA DMIVGGESTN AFCATRPPGH HAGKGLHPMK AVSNGFCVLN
AVACAAIHAT SSILEGGLGL KRVCIIDFDV HHGNGTQDIL CSTFNPHFLY VSIHAGGPHV
NGVAIDDDPD HELHELASNP KQGGGIYPGR CGDTSPHKGV LNIPLGSKVT AHAVGAALLS
TVTPAVNKFT PDLIILSAGF DAHKSDPMCL GSLNAEDFGH ITEVCCQLAY KSCSGRVLSV
LEGGYGVPCC RPQKNVFIPS PGRGDREIES ISQKQKDGPE LPPSTPSALQ IPRPQPSRLL
QLGDDLPESM DDQVPFALQR RLEKCHAEGF VECVKEHVAS LMRCNKRT
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