Gene PHATRDRAFT_50469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_50469 
Symbol 
ID7199269 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp150213 
End bp151163 
Gene Length951 bp 
Protein Length209 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185435 
Protein GI219130569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.558164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCTCGGTCCC CTCTCTAGCC TAGGGAACAG CAAGGAATAC GACGCTCGAT ACACTTTTGG 
GAAGCATTCG AAACAAAATG GCGGATCCCA ACACACCTTC CTGGTTATCT CCCGAAACTC
CGGCATCACC ACCGACTGGT ATGGTCCCGG TGGAGATTGA CAGCAGCGGC GTGAATGCCG
CCGCGGCGAG TCCATCCACG AATGCCGCCG AAGCATCCGC GGTTGGTGAT GCCGCGGACG
AAGCGGATCT CCCTGGAGTT ATTCTCATGA TGCGACTCGC CAACATGGCG GCCGCAGGCG
TCCTCATTGC TGTATCGGTA CGTTCGGAAG CGTAGAAAAA GAATCCTCGC GGTGTATGAC
GCGTCCACGG GTGAGAGTGA TTTACGCCAC ACTCTACGAC TGGCGGGCCG ACTGACTGTG
TTTTTGTTAG TATAAGTATC TACGCATCTC ACAATCGCGT TGCTTTTTTT TTCAATGGAT
CGCTTTAGAT TTGGTTAATG ACCACGATTC CGTCAATTAG CGCCTTTGTC CTCGCCTTCT
ACGCCACTTG CGGAGGCATT CTCATTTGCT GCCTCGAAAC CCAACTCAAG TTCCTGCGCG
TCGTCATTGC CGTCAATTTT GGTTTTTTGT TCCACTCCGT TTGGCGCTTC TTCTTTTATT
TCCTGTTGGC GTCGGTGGCC TGGAGTTACG ATCACTTGTT TGGGAAAATA GCCGCCGGTG
GGATGGGCGC CGCGGCCGTT TTCAACACCT ACGTGCTCTG CCGGTATCCG AGCTACCGGA
AAATGCGGGA CAAGATTGCC GAAGAAGAAG ACAAGCGTAT CGAAGCACGC ATCTCGAAAG
AAGTGCGTCG GCAGGCGGCC TCGCATCTCA CCAAGTAACC AGCACGATCC AAAGACTGTG
GGTGTAGCCG ACAAAGTCAT TTAGTAAATA TACATTGTTT GTGGCGATCG C
 
Protein sequence
MADPNTPSWL SPETPASPPT GMVPVEIDSS GVNAAAASPS TNAAEASAVG DAADEADLPG 
VILMMRLANM AAAGVLIAVS IWLMTTIPSI SAFVLAFYAT CGGILICCLE TQLKFLRVVI
AVNFGFLFHS VWRFFFYFLL ASVAWSYDHL FGKIAAGGMG AAAVFNTYVL CRYPSYRKMR
DKIAEEEDKR IEARISKEVR RQAASHLTK