Gene PHATRDRAFT_50457 details

Gene Information

• Locus tag: PHATRDRAFT_50457
• ID: 7199264
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 123145
• End bp: 126883
• Gene Length: 3739 bp
• Protein Length: 1065 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002185383
• Protein GI: 219130461

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0351497
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACGA ACACGGCGCC AGGTCGCGAA GAAAAGGATG ACCCGCAACG CATCGACGGT 
TCGGAATTTT TGGCCCAAGT ACGGGGAACG GGTGGAGGCA ATCCGTCACG GGATACAGCG 
ATCGCCACCG CTCACAGCGA AGAAACCTTG CGAGCCCGCA ACGGATCTTT GGGACAACGA 
CAGAATCTTG CCGCGTTGGC CGACCTTTTC GTCCAACCAA CATCGGTGTC TAGTCATCCT 
ACACTGGCTA GCTCGGATGG CGGCAGTACT TCCGCGACCT CGACAAGTAA CTCCCCACAG 
CCAGAGCAAG TGCATACTTT GCCGGCCAAT AATGGAGCCT CGCAGTTGCC AAATTCCTTG 
CCACCACGGC ATCCCCCACA TCACCAACGC AAGGTCTCAT GGGGGAGAGA TGTTCCGCAG 
GGAGAAGAGC AAACTCAACA AAGTCGTCAG AAACGCACGA GCAGTGGTGA TCTCGGTTTG 
AACTTGCCCG AGCTGGACTC GACGTCTTCA GCTCCACCGG TTCTCGAACA ACAGGTTGGA 
GACTCGTGGA TGCCTCCGCC TAGGCTTCGC CTGACCTCTT CCAATTCCGT CGGGGGTGCT 
CCACAGGGAG GCGATCGCCT TCGCCTGGAT CACATCCTCC ATGCCGGACC ATTTGAACAG 
GAAGCCGAAA CCCATATTCT CAAAGCTTTG GAGCAACAAG CCGCGGAGGA AGGGGCGATG 
CACCGCGACC GAGCGGACAC GGGAACCTCC ACGATTCTGA GCCACATTCC CGATTCCGTT 
CACGGTTTCC GTCTCGAATC GCCTAGGAAC TCTGTAGATT CTAACCAGGC GAACGCTACG 
ACGTCGGACA CCGGCGATCC GGTAACGTCG GAGTCACAAT CGGCGAGTCG CCAAGAGCAA 
ACACCCCTGG TACGAGAGCG TCCCGTCCCC CTACACAAAC GTAACCAGAG CGTGGAGCAG 
ACGTTGTTTG GTCTCACTAC TGCTTTGTCA GCCTTACACC ACGGAGAGCC CTTACCTCAT 
CAGGCACCGA CGCACAATCA GCGGCGACAG TCGCATCCTC CTCCTCCTGA TACGAACTCT 
TCTCCGGAAG AAGAACCTTT GGGGTCCGCG GATCAATTGG CCAACAACGC GGTACGTATT 
GCCAAAATGG AAGAAGAGGG GACGAAAAAG CAGAACAAAG GTGCAGAACG GTGGGCATCA 
ATTCAGCAAA ATTTGCCCAC TTTGTTGGAG GGAAAGCTGG AGAAGGTAGA GGCACCAGAA 
GGAGGCGACG TAGAAATAGG CAAGCAAGAA CCCAGTTCCA ATTCTGTGAC GAGCAGCAAT 
AGTGCATCAG ACGGAGTAAC GCAACGCCAT CGTTTCCGAA AAAATGGCCG TGGCGCTGCT 
GTCTTTGGAA ACGCCAACAC CCGTTTTAAA GAAGACGTAG AGCTGTGGCG CTCCTTTTTC 
CAACCCCGCC GAGGAGCCTT GAGATCTTAT GTAAAAAATG TGCTTCTCTA TTTGATATTG 
CCAGCGGCAG GTGTTGCAGC AATACTATAC TACTTGGTGG AGAATCCACC CACAGGAAAG 
TCAGAGGATG GCTCCAGCGG CGATCATGCT TCGGCGTCTT GGTGGATCTT ATTTATCTGC 
ATTCGCCAAA TTATTACTTT TTCGATGGCT CTCGGTGCCC AAACACTGAT TATTGACTAT 
CTCGCTCTGG GCAGCCGCAA TCTGCTCCGC CTCGCGGGTC CAGTTGTCAC CCTGCTCATC 
GTTCAAAGCA AGGGATGGCC CTTTTTGTTC TTCTCTTGGT CGTTGTTTGA CTTCGCGATG 
CTGTCTGGTA CGGGTCCTTT TGCTGCGCAC TGGGCCTTCT GGCAGAATAC TGTCGGGCTT 
TTCAACGAAA AGAATCCAAG CGGAAATGTG GTCTCAAATG AATGGAATAT TCGTTTGTTG 
GCTGTTGCGA TGTGCGTAAG CTTGGTTGTG GCCGTCAAAC GCTTTTTGAT AGGATTATAC 
CTGGGTCGAC AAACCTTTGC TCATTTCGGG AAGCCTCTGG CGAAAGTTAT GAAGAAAATG 
CTGCTCGTAG GTGAAGTGGC TGCACTGGCA AGGGATATCG AAAAAAAGGA ATCAAATCGA 
AACCAATCAA ATCGAGAAGG GAACTCACAG TTTGGTTATA GGCTTGATAG TCATGTTAGC 
TTGAGAGGCT TAGCATTGTC TTCCGACGAC GAAGATGGAT CTACCACCGA ATCGCCAACA 
TCGCGTAGAG GAAGTGTGGA CACTTTGCAA TCCGACAGGG TGATCAATAT GAACGATCGC 
GACCCGCTGA CGGGAAACCT GCAGTATTCC GAAAAGATGA AGTTGAGACA ACTGTTAGAG 
CGGTGGGAAG AACCGGATCG GGAATTTGAT CAGCAGAGGG TGAGTCCTTT TGTCGCTAGT 
AAGGAAGCTT CGATAGTTCA AAATTCTCAC GAAGATAAAC TTGCAATTCC ACAGGATCAA 
AAAGCCTCCA TTTCCGCTGT TTTAAACTTT CGGAACGCTC TCACCTTTAT TCAGACAACC 
TACCCGTTCT CTTTTGCGTT TGGCCCCGCA CATTATAGAG AGCAGTGTAT CGATTCTGCA 
CAAGAAGTCT ACATGCGCCT TTATAAGCAC AATGCGGAAG AGCTGGTCCT TCACTTTGAG 
ACTATTGCCC TTATTGCTCT TCGTGAGGAC GGCAGCGTTG ACCAGGACAA AGCGAAGGAT 
TTGGTTAAGC TCTTTCGTCC AGACCGCGAG GGAAATTTGA CTATGCTGGA TTTTGTAAAA 
AGCATCGATG CTGTTTACAA AGACTTTCGG CTTTTGAGTG CTTCGATCGA GAACTCTACA 
CAGATTGACC GTGCATTCGA AAACATTTTC AATATTGGAT TCTATGCCGT TGTGATCACG 
GTAACATTAT CACAGCTGGG ATTCGATCCT TTGGCCCTTT TTCTAAGCCT TTCCTCTGTC 
ATTCTCGCAT TCGCTTTTGC GATTGGCAGC GCATCTGCGA AATATTTTGA AGGGGTTCTG 
TTTATTCTTG TCCGCCGTCC TTATTCGATC GGTGACCGGG TGCATGTGTC GAACGTCGAA 
GCCGATACCA GCTTTGACGG ATCGCCTGGC TGGGTTGTGG AAAACGTAAC ACTTTTTGAA 
AGTAAGTTGC CGTCTGGGAT GGCCTGTTCA CATTTGGCTC CATTGGTCTG ACTAACGCCG 
TTGCGTTTCT TTGTTGATAG CCACGGTTAT TTGGGGGCCC ACCAACGAGC GTGCTAGCCT 
GTCCAACGGC TCGCTTGCTA ACAGTCGTAT TATCAACCTT GCACGATCGC CACAAGCCCA 
ATTATTTATC TATCTCAAGA TCCCAATTGA CACTTCCTAC GAAAAGATTC TGATTTTCAA 
ATCAGCCGTG GAGGAATACA TGAAGGCCCG TCCCCGGGAA TGGCTGGCAC TCAATGGTTT 
TCGGGCGAAT CGTATTGCTG CCGACTTGGG CTGGACGGAA TATCTTATTA TCATTCAGCA 
CCGTGAAAGT TGGCAAGAAG TGGGTCAGGT CCTCGATAGC AAGGCCAATT TGAGCAGTTA 
TTGTCAGGAA GTGGCCAAAC AGCTCAACAT TCACTACAAA GCGCCACCAC TACCGGTCAA 
TCTCAAGTAC GCACAAGCGG CCAGTCCAGA GGAAGTCCTG GAAAGCAGCG ATGCGATTGA 
CACCGATTTG GACAGTGTGG CTCGGACCCA AGAATTTCGG TCGATGGCCT TGAGCAAGCA 
CAACATTCGA TACAGTTAG 

 

Protein sequence

MNTNTAPGRE EKDDPQRIDG SEFLAQVRGT GGGNPSRDTA IATAHSEETL RARNGSLGQR 
QNLAALADLF VQPTSVSSHP TLASSDGGST SATSTSNSPQ PEQVHTLPAN NGASQLPNSL 
PPRHPPHHQR KVSWGRDVPQ GEEQTQQSRQ KRTSSGDLGL NLPELDSTSS APPVLEQQVG 
DSWMPPPRLR LTSSNSVGGA PQGGDRLRLD HILHAGPFEQ EAETHILKAL EQQAAEEGAM 
HRDRADTGTS TILSHIPDSV HGFRLESPRN SVDSNQANAT TSDTGDPVTS ESQSASRQEQ 
TPLVRERPVP LHKRNQSVEQ TLFGLTTALS ALHHGEPLPH QAPTHNQRRQ SHPPPPDTNS 
SPEEEPLGSA DQLANNAVRI AKMEEEGTKK QNKGAERWAS IQQNLPTLLE GKLEKVEAPE 
GGDVEIGKQE PSSNSVTSSN SASDGVTQRH RFRKNGRGAA VFGNANTRFK EDVELWRSFF 
QPRRGALRSY VKNVLLYLIL PAAGVAAILY YLVENPPTGK SEDGSSGDHA SASWWILFIC 
IRQIITFSMA LGAQTLIIDY LALGSRNLLR LAGPVVTLLI VQSKGWPFLF FSWSLFDFAM 
LSGTGPFAAH WAFWQNTVGL FNEKNPSGNV VSNEWNIRLL AVAMVINMND RDPLTGNLQY 
SEKMKLRQLL ERWEEPDREF DQQRTTYPFS FAFGPAHYRE QCIDSAQEVY MRLYKHNAEE 
LVLHFETIAL IALREDGSVD QDKAKDLVKL FRPDREGNLT MLDFVKSIDA VYKDFRLLSA 
SIENSTQIDR AFENIFNIGF YAVVITVTLS QLGFDPLALF LSLSSVILAF AFAIGSASAK 
YFEGVLFILV RRPYSIGDRV HVSNVEADTS FDGSPGWVVE NVTLFETTVI WGPTNERASL 
SNGSLANSRI INLARSPQAQ LFIYLKIPID TSYEKILIFK SAVEEYMKAR PREWLALNGF 
RANRIAADLG WTEYLIIIQH RESWQEVGQV LDSKANLSSY CQEVAKQLNI HYKAPPLPVN 
LKYAQAASPE EVLESSDAID TDLDSVARTQ EFRSMALSKH NIRYS