Gene PHATRDRAFT_50453 details

Gene Information

• Locus tag: PHATRDRAFT_50453
• ID: 7199262
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: +
• Start bp: 111327
• End bp: 113677
• Gene Length: 2351 bp
• Protein Length: 279 aa
• GC content: 56%
• Product: predicted protein
• Protein accession: XP_002185381
• Protein GI: 219130457

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0815449
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CGCTCGGGCC TGCCGTACTT GATCTCCCAA CCAGGGACAG CGTTGGAACA GTAGGTAATC 
GTGACAGTAC AACAGGATGG GTGTAGTGAG GACCTTCTGG ATGCGTCCGT CTTCATCCTT 
GACTTTCCCG CGACAGTCCA AGACGACGTT GGCGTCGCGG ACTTGCATAG TGCCGGCGGA 
TCCGGAGAGC ATGGAGTGTA GCTGGTGGTA GTAGTTCTTG TCCGATTCTC GTTCGAGGCG 
AATGCGTTCC TGTTCCACCG CTTTTCGGTT ACTCCGGTTG GGCCGAACCT GCACCCGATC 
GCTCTTCATG AGGGCGGCCG ATTCGGCCGT ATCTTTGCCG TCAAGTTTTT GCACGTGGAC 
GAATTCCAAA TCGTGTACGG CGACGGACCC TTCCGGGAAT CTTTCCCGAC ACACCTGTAC 
GTACCGGTTC ATGACGGCTT CCAAACGCAC GTTCTTGTCG AGTCCAATCT GGACCGTCGT 
GTTGAGTTGC AGAACCGGGT GATTGGGATA AGACGGGTGC ACTTCGGTGC AGGTGAAAAA 
GAGCGTCTGT GGCGGTGCGA CAATACCACA AAAAAAAAAC AGAACAACGT GAGGCAAAGT 
GTAACAACCA AACACACAAG GGTTCGCAGC GGGGAGAGGA GTTTCTAGAA TTGTATTGTT 
TGTCGTCCGG GTGCGTGGTG TACGATCAAT GGTGTGTTCC GGTACGTTTC TCTTCCGGCA 
AAGGACTTAC AATGTCGGCT TCCTGTGCCG TGCGCGTGGC TTCGGTTTCT TCCGATGCTT 
CGGCCACGCC CCCTTCGATA ATGTCAGCGT GTCCCGCTCC TTCTTCCTCG TTGTCGTCGT 
TGTCCCCCTC TTCTTCTTCC ATTGGATCTT CTTCTTCATC GTCATCATCG TCATCACCGT 
CCTCTTCTTC TTCGTCGTCG TCGTCGTCTT CTTCCGGTTC ACCCAAGACT ACCGGAGCAT 
CCGGAAGAAT GCCTTCGGGT GCTTCGTCCT GACGATCGTT CATCGATGGC GTAGGTTATA 
TGTAATTGGG AAACGAAAGG TCGTGGTAAC TTATCCCCAG CGACCGTACA AGATTGATTG 
AAAACGTATC GGTCGATGCA GTGCGTTCAA TCGTCGATTT TACTAGGGGA CATTCGCCCG 
ACTGCGTGGA ATGGAAAAGA ATAGTGAGTG TGGTCGTGTG CGCCATGGTC CGCTGGGGTG 
CCACGAGCAA TCGGGATGCC GTTCCCGAGT TCGTACGGTA CGTACGGCAT ATGCCTTCCC 
CACCCTCGGA GCGGTATCTA CTGTCTACTT GTAAATGTCG TTTACGACTG ACTTGTACCG 
TCGTCTGGAC TCGTCGGAGA GCCAGCAACC TACCCAACAC GAATCTAACT AGACGGCCAC 
AAACGGCCAT GGGAACTACG GATCTCACAC CCGTATCGAT TCGACAGACG ACTAGTTGAT 
CACCGTGCCA GTATTCTGGT GTGACACAGA CGCGTGTGTT GTTGTCCAAA AAAGGCCATG 
AAGTTTCGTC CATGCATTGA CTTGCACCAC GGCCAAGTCA AACAAATCGT CGGGTCGACA 
CTCCGGTTCA CGAGCCCCAC GACCGACCAC GATGACGACA CCGTGACGGC TTCCTCGGTT 
CCGGAATTGG CCACGAACTT TGCGACGGAG CGTCCGGCAC GGGAATTTGC CGAACGCTAC 
GCCCGGGATG GTCTCACTGG TGGACACGTC ATTCTCCTGG GTCCGGGCAA CGCGGACGCG 
GCCCGTGCCG CGCTCCGCGC CGCTCCCGGA ACCTTGCAGG TCGGGGGAGG TGTCCACGAC 
GCCAACGCAC GGGAATGGCT CGATGCCGGA GCCTCGCACG TTATTGTCAC CAGTCACGTC 
TTTAGTAACG GACAAATCGC CATGGATCGT TTGGAACGGC TGGTACAACT CATTGGCAAG 
GAACGTCTCG TGCTCGATTT GTCCTGTCGG AAACGTCCCG ATGACCACAA CAACGGACCG 
TACTACGTCG TCACCAATCA GTGGCAAGTC TTTACCGAGT ATGCCGTCAC GACGGAAAGT 
CTCCGGACGT TGGCGGCCTA CTGTGACGAA TTCCTCGTCC ACGGCGTGGA TGTCGAGGGA 
CTCCAGTGTG GAATACTGGA CGATCTCGTG ACGCTCTTGG CCACGTCCCC CGTACCCGTC 
ACCTACGCCG GTGGCGTCCG ATCGATCGAC GATCTCAATC GCGTCGAACA ACTTGGACAA 
GGCAAGGTTG ATTGTACCGT CGGCAGCGCA CTGGATATCT TTGGCGGCAG CTTGCCCTAC 
GCAGACGTTG TGGCCTGGCA TCACCAACGC AACGGTGGGG CCGTGGCGCC GGCGTGAACA 
CGATTGACGT T 

 

Protein sequence

MKFRPCIDLH HGQVKQIVGS TLRFTSPTTD HDDDTVTASS VPELATNFAT ERPAREFAER 
YARDGLTGGH VILLGPGNAD AARAALRAAP GTLQVGGGVH DANAREWLDA GASHVIVTSH 
VFSNGQIAMD RLERLVQLIG KERLVLDLSC RKRPDDHNNG PYYVVTNQWQ VFTEYAVTTE 
SLRTLAAYCD EFLVHGVDVE GLQCGILDDL VTLLATSPVP VTYAGGVRSI DDLNRVEQLG 
QGKVDCTVGS ALDIFGGSLP YADVVAWHHQ RNGGAVAPA