| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_50437 |
|---|
| Symbol | |
|---|
| ID | 7199251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011698 |
|---|
| Strand | + |
|---|
| Start bp | 62908 |
|---|
| End bp | 64561 |
|---|
| Gene Length | 1654 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002185370 |
|---|
| Protein GI | 219130434 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.138567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCGACTCTAC TGTTACGCAG GCGAGACCAA AGACTAAAAT CACCACCAGG CCAGCAATTA
CTTGACGATG GGAGTCTTTA CGGTCTACTT GGACAGGATC GCCAATCTTC GAGACAGCGA
TACGCTTGGA AAGTCTGATC CATACGTCAA GTTTGAGCTA GAACAAGACA ATTTCGTCTT
CGATAAGGGA TTTGGCAAGC AAATTTCTTC CAAAAAGAAG AACGATCTTA ATCCTGAGTA
CGGCGAAACG TTCACATTCA AAGGTGTTCC GTCCATGAAT AATATCGTGC TACACGTCAA
GGTTATGGAC GACGATATCG GTTTTGATGA CGAAATTGGA TCAGCGAAAA TATCTATGGA
AAAGCTTGGG TTGACGAAAG TACCAAAGGA GATCGAGAGG GTAATTGACC ACAAAAAGGG
TGGAGGCTGG TTTTCGAGAA AAGCCAAGAT TTATCTGAAG GTCTCCTTTG ACGAGGGTGG
CGAGTAAAAG AGTGGGTTGC GTGGACACAC AGACGTCCAG CAATACGTCT TTCGGTTTTC
GATGAATACA TTGTCTATGT GACAGCTAAC TTTTTAGAAT TGAGGAATGC TCAGCGTCTT
TCGTAGTGTC TTTGAATAGG GAAGAAATTC AGTGCGTCGC TCTTACCGTC GGCAAATGCA
GAATTCGCTA TTCTTGCTCT CTGCTCGATC AAAGAGGTTG TTATAAAAAG ACGGCTACAG
GTGACGGTCC GGAGCCATCA CAATTTGATA AATATCTCAA CTAGGCTGCC GCTGCTGTAT
GCTTTTCGAT GCTACTGTCA GTGATTCCGA CAAAAAATTC GGATTCTTCT GCCATTCTTT
TGATAACACG GGTGAGACTC GCATGCGTCG AGTGCGCTTC CAAAAGGCTC CCTCGGGAAA
AAAGAAGCAC GCCGATAGTA TTGAGATGCA TAGCGGCAGC AATCGTCTGC TGAGTGTATC
GCAGATGGTC TTCGGGTGAG GCGCGAATCT GATTTTGTAA AATAAAATGT CCCACCCGGA
GAACTTTTGC TGCCCGGGTG AGTGCTTTGT TGGAAGTGCC CTTGTCCACT TGCATACGCG
CAAGGCAAAT CTGAGAAAAT CCCATATTTT GCAGCAAAAT TGCGGCGGTG AGTTCAACAT
CTTTTTCATC ATGAACTCCG TGGAGTCCCC AGTCGATACT GGTTTCTATG CAGACACAAA
TACCGACTGA TGTTGCCCGG GTTTGATTCA GCAAAAGCTT CATGGCTGAT GATTTCCATT
CGTTGCTAGG TATGACAACA ATAGGTAGTT CACTTTGGGT GGAAACTCCT TTTTTGTTTG
AATTAGAAAG GCGCTGTGAT GCAAGTCGAA GTCTGTCTTC AGACTCAAAC ATCGCAGCGC
GAGGCGTTGC TAGATCGGAA ACGTCAGAAT CAACAGAATG CCGGAATGAT AGCTGAATGG
CAGAAATCGC ATCTTTGAAT GCCGTACAGG CTCCTGAAAA GTCATGTTTC TCGAGAAGAC
GAACACCAAT ATTATTCAAA GCGATGGCGA CGCTGTACGC GTGCCGATGA GTGTCGGAGC
TGTGGGTGCT CATGGCCTCA AGGGAGATTT ATCACAATAA ATGAGCGTGA AAGAAGTGTC
AACAGTAGCA GATAACGAGG AGGAAGCGAG AAAG
|
|---|
| Protein sequence | MGVFTVYLDR IANLRDSDTL GKSDPYVKFE LEQDNFVFDK GFGKQISSKK KNDLNPEYGE
TFTFKGVPSM NNIVLHVKVM DDDIGFDDEI GSAKISMEKL GLTKVPKEIE RVIDHKKGGG
WFSRKAKIYL KVSFDEGGE
|
|---|
| |