Gene PHATRDRAFT_50435 details

Gene Information

• Locus tag: PHATRDRAFT_50435
• ID: 7199250
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011698
• Strand: -
• Start bp: 58226
• End bp: 60356
• Gene Length: 2131 bp
• Protein Length: 527 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002185422
• Protein GI: 219130542

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGGTTCTTT GTATAATAGT ACCTACCGGT GCCAACAACG ACAACAACAC AACAACAACT 
TCAAGATTGG GTTCCAGTTG ATTCAAAAGG TAACAAGTAC TCTGCCATTG TAGGTCGTAG 
AATAGGTGAG GCGCAACCTA CCAAACTCCA AACTAGTAAC AACAACACGT TGTCTTGGGA 
GCCAAAGAGT CTTTTGGGGG TTTTTCTCTC TGATTCGTCT CGAGCTCGGG AGCTTCTCCG 
TTGTACTCAC GCTAGGGGGT AGAAAAGGAA TTCTTCTTTC CTGTCGTGAA CAATGGCGAC 
ATCCACCAAT CGGGAACATT GGTCGCATCC TCCGGCGGTA CACCCTGCCC GACCCCCCGT 
ATACGACTCA CCGTACGAAC GTCGCGAAGG TCCTCCCCCT ACGTACGCGA CACCCTCGCC 
GTACCAGCCG AGAGGTCCGC CTCCGGACCA TCACTACTAC TATCCACAAC AACAACAACA 
ACAACACATC CACACGCATC CCGGGGTCCA CCCCGTCCCA GCGGATGGTC TCACGGAGGA 
GGAGGAGGAG AACCCTACGA ATCCTACGCT GGGGGACCTG CGGCGTACCG GGGATCCTCT 
GCCGCCACGT ACGGCGCACC GTCCCGGAGG GCCGCCTACC CTCACGTGCC GGTGCGTCCA 
CCCCGACCTC ACGACTTTGC TCCGCCGCTT TCGCGTTCCG GTTGGAGACC TCCGGTAGCC 
ACGGAACGAC ACGTGCGTGC CAACACCAAT CCTCCGCACA AGTCGCCTCC CAAAGCGGGA 
GATACCGGTT GTGCGACCAG TGCCTCTACC AATCGTGTCA GTAGCCGTAC CAAGAAAAAG 
GATGCGGATC CCCTGGCGCT GCTCGCCAAG GTGAGTTCCA CCATGGAAGA CGACGAGGAC 
GAAGAAGAAG TAAAGGAAGC TTCCCCTACA TCCCCTTTAC AGCGCCGCAG TCAGGAAGTC 
CCCGTGGCGA CCGCTACGCC CAAGTCCGAT CCGTCGACCT ACGTTCCCCG ACAGCCAGCG 
TACACGTACG GTCCCAAGCC CATTACGCCC ACCGGAAACT ACTCTCCCTA CGATGACGCT 
CCACAGTACC ATCATCACCG GGGACCGGCC TATCCACCAC CACAAACCCG GGGATCGTTG 
CCCCCTCATC CGTATCCACC GCCTTCCTAC CTTCCGCACG CTCGAGTCGG TCCTACGGAA 
TGGGACACGG GACGTCCCGT CATGGTGGAG CGTACCTCTT TTGATAGCCA CGACAGTGGG 
GACTACAGTC GCGGAGCGCC ACCACGCTAC TACTACGATG GTCCGGACTA CGGACCGAGT 
TCGCCGCCAC AGCACTACTA CGCTCGCAGT GGTTCGTACC CTCCCTCGTA TGGTGGTCCA 
CCACCCCAAT GGGGATACGA AGGTCCGCCG TCACACGCTC CATTCTACCC CCCGCGGGGT 
CCCCCCACCG CGCACGGCGG ACTTTACGAG CGACCAGGTC CGGAGCGAGA CGCGCCACCA 
CCCCCGTACC AGTCCTCGAC GGCCGCACCC TACACATACG TGCAACAACC AACCCTGGAA 
GAGAAAACGG TTCTGCGCAA AAAGTTTTCG TGGAAACATT ATCCAGAGGT ACGTTTCGCC 
GCAATAACAT ACCGTTCGTT CAGTTTACTC GAGTGCGAAG GTACACTGCT CACACCATGC 
GCTTGCTTAT GTTACCTCTT TCTCGGGACA ACAGCTGGAA CGATTCTTGA TCTCGCATCG 
CGACGAGTAT TTGGAACATT CCAGTAAGAA CTACACTGCG GAACAAAAGA CGTACAACAA 
CTGGTTGACC AATCAGTTGC TCCATTTGGC TGCCCAACAC AACTACCAGT TTGATCCGCA 
AGCCTTCACC TTTGTTGCCA TTCGCGATCG CATTCGTTGC TACTACAAGT CCTACGTCCA 
GACGGCCCGG AAACGAGGAC TGCCGCTGCC GACTACTCCA TCCATTAAAA AGACCAAGTC 
GCCACGCGAC GGCGACGAAG AAGTGTCTTT GTCGACGCCG CCAGTGGAAT CCAAAGGTGT 
GACGTCATCA GGCAACAATG AAGGCGAGAC TGGACGAGCG GCGAACGACG CGATGACAAC 
CGATCCTCGG GAGGATTCCG GAACCGATTG A 

 

Protein sequence

MATSTNREHW SHPPAVHPAR PPVYDSPGWS HGGGGGEPYE SYAGGPAAYR GSSAATYGAP 
SRRAAYPHVP VRPPRPHDFA PPLSRSGWRP PVATERHVRA NTNPPHKSPP KAGDTGCATS 
ASTNRVSSRT KKKDADPLAL LAKVSSTMED DEDEEEVKEA SPTSPLQRRS QEVPVATATP 
KSDPSTYVPR QPAYTYGPKP ITPTGNYSPY DDAPQYHHHR GPAYPPPQTR GSLPPHPYPP 
PSYLPHARVG PTEWDTGRPV MVERTSFDSH DSGDYSRGAP PRYYYDGPDY GPSSPPQHYY 
ARSGSYPPSY GGPPPQWGYE GPPSHAPFYP PRGPPTAHGG LYERPGPERD APPPPYQSST 
AAPYTYVQQP TLEEKTVLRK KFSWKHYPEL ERFLISHRDE YLEHSSKNYT AEQKTYNNWL 
TNQLLHLAAQ HNYQFDPQAF TFVAIRDRIR CYYKSYVQTA RKRGLPLPTT PSIKKTKSPR 
DGDEEVSLST PPVESKGVTS SGNNEGETGR AANDAMTTDP REDSGTD