Gene PHATRDRAFT_41496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41496 
Symbol 
ID7199245 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp316463 
End bp316945 
Gene Length483 bp 
Protein Length137 aa 
Translation table 
GC content55% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185416 
Protein GI219130530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGCGT CTACAATGCA GCACGCGAAC AGCATTGACC GCGGATATTT TTTGCGGATA 
GGGTAGGCTA ACACCAGAGA AGACTTACTC CACTTGACGA CTACCACGGA TTGGTCGGAG
GAGGAAAAAT TCCTGCAAGA ATTGGAAAGC AGTGTCTTTT TGTACCAGGA CCGTCCGCTC
CCGCTGACTC CCGCCACAAC GTCGCTCAAC TATGGCACCA CCTTGTGGGA AGGATTGAAA
GCGTACCGCG TCAACAACCT CAAGGCCGTC GTGTTCCGTC CCGAACAGAA CTATGCGCGT
ATGCGGGCGG GGGCACACGA AATGTGTCTA CCCATGCCGA GTAAGCGTTT GTTTCTCCGA
GCGGTGCAGC TCGCTGTCCA GGAAAACGCG CACTTGCTGC CTCCCGTTGG TGACGGCATG
AAGCTTTACG TCCGCCTCAT GCTCCTGGGA TCCGGACAAC AGCTTGGACT CTACCCAGAG
TAG
 
Protein sequence
MCAEDLLHLT TTTDWSEEEK FLQELESSVF LYQDRPLPLT PATTSLNYGT TLWEGLKAYR 
VNNLKAVVFR PEQNYARMRA GAHEMCLPMP SKRLFLRAVQ LAVQENAHLL PPVGDGMKLY
VRLMLLGSGQ QLGLYPE