Gene PHATRDRAFT_41470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41470 
Symbol 
ID7199230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp244227 
End bp245222 
Gene Length996 bp 
Protein Length331 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185454 
Protein GI219130609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.651438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGA CCCCCACTGC TGCTCCCACA AGCTCCTTCA CGAAAACCAC GGTACTGAAC 
AACGGTTGCG TCATTCCACT CGTTGGCCTG GGCACGTGGA AATCCGAACC CGGTAAGGTC
CAACAGGCCG TGAAAGAAGC CATCCGTCTG GGTTATCGAC ACGTTGATTG TGCCTTTTGT
TACCACAATG AAAAGGAAGT AGGCTTGGCA CTGCAAGAAT GCTTTGCGCA AGGGTTGTGC
CGACGCGAAG AGTTGTTCGT AACTTCCAAA CTATGGTGTG ACAAGCACCA TCCGAACGAT
GTCCGCGACG CCCTTCGGAA TACGCTTTCG GATTTGCAAC TGGACTATTT GGACATGTAC
CTGATGCACT GGCCCGTAGC GATCAAAATC AACTGGCCCG AATCTGCCGA CGACATGATT
GCTCTCGATG ACTTGCCTAT TGCCGACACG TGGAAGGTCA TGGAGGAATG CGTCGATCAA
GGTTTGACCA AAGGTATCGG CGTTTCGAAC TTTTCCATCA AGAAACTTGA GCATTTGTTA
GCTTCTTGTC GCATCCCTCC CGCCATCAAT CAAGTTGAAC GTCACCCCTA TTTGGCACAG
CCGGATATGA TGGAACATTG TGCACGTAAA AACATCCACG TGACGGGATA CAGTCCACTC
GGTTCGTTGG ATCGCCCAGC CGGTCTGAAG GGACCGGACG AGGTCAACTT ATTGACCGAT
CCTACCGTCA CGAGCGTTGC GAACAAACAC GGCATCAGCA CAGCACAAGT CTTGTTGAAA
TGGGCCGTCC AAACCAACGC CAGTACCATT CCTAAGTCAA TTCATCCGAC CCGCTTGGCG
GAAAATCTGA TGGTGGGTCG TGACGATTTT CCCGACCTGG ATCAAAGGGA TTTGGAAATG
CTCCAGTCGC TGGATGCGCA CCGACGTTAC GTGACCGGCG CCTTCTGGGC CTTGCCGGGA
GGACCGTATA CGGTCGAGAA TCTTTGGGAT GAGTAA
 
Protein sequence
MLTTPTAAPT SSFTKTTVLN NGCVIPLVGL GTWKSEPGKV QQAVKEAIRL GYRHVDCAFC 
YHNEKEVGLA LQECFAQGLC RREELFVTSK LWCDKHHPND VRDALRNTLS DLQLDYLDMY
LMHWPVAIKI NWPESADDMI ALDDLPIADT WKVMEECVDQ GLTKGIGVSN FSIKKLEHLL
ASCRIPPAIN QVERHPYLAQ PDMMEHCARK NIHVTGYSPL GSLDRPAGLK GPDEVNLLTD
PTVTSVANKH GISTAQVLLK WAVQTNASTI PKSIHPTRLA ENLMVGRDDF PDLDQRDLEM
LQSLDAHRRY VTGAFWALPG GPYTVENLWD E