Gene PHATRDRAFT_41393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41393 
Symbol 
ID7199301 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp55653 
End bp56510 
Gene Length858 bp 
Protein Length222 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185421 
Protein GI219130540 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTCC ATATTTCACT ACAGCTCTTG GGGTTCCTTG TCCTCGCGAA TGCTGTCGAT 
ATCAGTGCCA ACGATAGCCG TCAAGGAGGA CGACTGCACA CGCTTCGGCG AACAAAAGGA
AAGACTGACG AGCTCACTCC TGATGAGAAC ATCGAGGTGG CCACCGACGT ACCCAGCTCA
TCAAAAACGA AAGGCAAGGG ATCTAAATCC GACAAGGGCC GTGACCGCTC CGATTACCCG
TCGTTGGCAC CCGTCGCTCA GCCAAACAGC TTGCCGGTCA CTGTGCCAGG CGACATGCCC
AGCTCCAGTC CTTCGCCATC AAGTCCAGGC AACGTGCCTT CTGCGACTTT GTCCGACGTT
CCGAGTTCGT CATGGACGTC CGCTACCCCA AGCGCCGTAC GCGCTCCGTC TATTTCGGGT
GCTCCGAGTA TCATTCTTTC CGCTGTTGAA AGTAACATTC CAAGCACCAT TCTTTCCATG
CTTGATTCCG ACGCTCCAAG TACCCTTCTT TCCACGTTCG ATTCTGAAGC GCCGAGCGAT
GTACCGAGTG ACGTGCCCTC AGCTGTTCCG ACAGAAGGTG TGGACCCCAT ACGAAGAAGT
GAGGGCAAAC CCGGTCGTAA GTTCTTCTTC ACGTTGCCAT GAGAAAAGCG TATGCTACGA
TTGTTGGTCA CCGCCAGTCC TAGTTAAATC ATTAGATGCG CTGCTTTTCG CATTGCGTGC
AAAACCAATC TTCACATGCA TACTAGCAGA CGTTAGCCTG GCTCGTCGTA TAGTTTTTCA
GGTGATTTCT ACAGCACATA TTCAGGCGCG GAGAAAAACG AAAATTCGCC TTCCCTTCAC
GGCCAAGTTT ACAGTTAA
 
Protein sequence
MRVHISLQLL GFLVLANAVD ISANDSRQGG RLHTLRRTKG KTDELTPDEN IEVATDVPSS 
SKTKGKGSKS DKGRDRSDYP SLAPVAQPNS LPVTVPGDMP SSSPSPSSPG NVPSATLSDV
PSSSWTSATP SAVRAPSISG APSIILSAVE SNIPSTILSM LDSDAPSTLL STFDSEAPSD
VPSDVPSAVP TEGVDPIRRS EGKPGRAEKN ENSPSLHGQV YS