Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41393 |
Symbol | |
ID | 7199301 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | - |
Start bp | 55653 |
End bp | 56510 |
Gene Length | 858 bp |
Protein Length | 222 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185421 |
Protein GI | 219130540 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTCC ATATTTCACT ACAGCTCTTG GGGTTCCTTG TCCTCGCGAA TGCTGTCGAT ATCAGTGCCA ACGATAGCCG TCAAGGAGGA CGACTGCACA CGCTTCGGCG AACAAAAGGA AAGACTGACG AGCTCACTCC TGATGAGAAC ATCGAGGTGG CCACCGACGT ACCCAGCTCA TCAAAAACGA AAGGCAAGGG ATCTAAATCC GACAAGGGCC GTGACCGCTC CGATTACCCG TCGTTGGCAC CCGTCGCTCA GCCAAACAGC TTGCCGGTCA CTGTGCCAGG CGACATGCCC AGCTCCAGTC CTTCGCCATC AAGTCCAGGC AACGTGCCTT CTGCGACTTT GTCCGACGTT CCGAGTTCGT CATGGACGTC CGCTACCCCA AGCGCCGTAC GCGCTCCGTC TATTTCGGGT GCTCCGAGTA TCATTCTTTC CGCTGTTGAA AGTAACATTC CAAGCACCAT TCTTTCCATG CTTGATTCCG ACGCTCCAAG TACCCTTCTT TCCACGTTCG ATTCTGAAGC GCCGAGCGAT GTACCGAGTG ACGTGCCCTC AGCTGTTCCG ACAGAAGGTG TGGACCCCAT ACGAAGAAGT GAGGGCAAAC CCGGTCGTAA GTTCTTCTTC ACGTTGCCAT GAGAAAAGCG TATGCTACGA TTGTTGGTCA CCGCCAGTCC TAGTTAAATC ATTAGATGCG CTGCTTTTCG CATTGCGTGC AAAACCAATC TTCACATGCA TACTAGCAGA CGTTAGCCTG GCTCGTCGTA TAGTTTTTCA GGTGATTTCT ACAGCACATA TTCAGGCGCG GAGAAAAACG AAAATTCGCC TTCCCTTCAC GGCCAAGTTT ACAGTTAA
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Protein sequence | MRVHISLQLL GFLVLANAVD ISANDSRQGG RLHTLRRTKG KTDELTPDEN IEVATDVPSS SKTKGKGSKS DKGRDRSDYP SLAPVAQPNS LPVTVPGDMP SSSPSPSSPG NVPSATLSDV PSSSWTSATP SAVRAPSISG APSIILSAVE SNIPSTILSM LDSDAPSTLL STFDSEAPSD VPSDVPSAVP TEGVDPIRRS EGKPGRAEKN ENSPSLHGQV YS
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