Gene PHATRDRAFT_41386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_41386 
Symbol 
ID7199246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011698 
Strand
Start bp4999 
End bp5508 
Gene Length510 bp 
Protein Length169 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002185417 
Protein GI219130532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00618201 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGAGC TGCTTCCAAC CCATGAACCC GGGACGGACT TCACAAAACT CTATCCAGTC 
AGAAGTCCCA ATCCGGGGAC TGGGATTGAG CTTGCAGCCA AAAAATTGTC GTACAGAACC
CTGCTGGAGT CTCAACCGTT GGCATGCCCA GAAAAATTGT ACAAAGCTCT ACCCTACGTC
GCCCAACTCC ACTGCTCCCA TTCGACTTTG CACCAATCCA AACTCAAAAG GAAATTGAGA
AACCGTGACG TGCCAAGCTG CTGCAAGCGC AACGCATTGA AGCAGAAAGG CAACGCCAAA
GACTCAAAAA GCAACGTCGC AAAGAAGCAG CGCGTGCCTG GGAAAATGAC GCCACCATTG
CAACAGCAAC TGCCAAGGCA GTGTCCCTTC CCGTCACCAT CCACTCTGCA CATCTTGGCA
ATTCCCCCAT CAACCCCTAT GGTGACTGCC GTCCAGGCTC CAGTGTCTCT GGAAAAGTCC
TCCACTCCCC CCCCCCCCCC CCCCAACTGA
 
Protein sequence
MDELLPTHEP GTDFTKLYPV RSPNPGTGIE LAAKKLSYRT LLESQPLACP EKLYKALPYV 
AQLHCSHSTL HQSKLKRKLR NRDVPSCCKR NALKQKGNAK DSKSNVAKKQ RVPGKMTPPL
QQQLPRQCPF PSPSTLHILA IPPSTPMVTA VQAPVSLEKS STPPPPPPN