Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_41386 |
Symbol | |
ID | 7199246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011698 |
Strand | - |
Start bp | 4999 |
End bp | 5508 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002185417 |
Protein GI | 219130532 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00618201 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATGAGC TGCTTCCAAC CCATGAACCC GGGACGGACT TCACAAAACT CTATCCAGTC AGAAGTCCCA ATCCGGGGAC TGGGATTGAG CTTGCAGCCA AAAAATTGTC GTACAGAACC CTGCTGGAGT CTCAACCGTT GGCATGCCCA GAAAAATTGT ACAAAGCTCT ACCCTACGTC GCCCAACTCC ACTGCTCCCA TTCGACTTTG CACCAATCCA AACTCAAAAG GAAATTGAGA AACCGTGACG TGCCAAGCTG CTGCAAGCGC AACGCATTGA AGCAGAAAGG CAACGCCAAA GACTCAAAAA GCAACGTCGC AAAGAAGCAG CGCGTGCCTG GGAAAATGAC GCCACCATTG CAACAGCAAC TGCCAAGGCA GTGTCCCTTC CCGTCACCAT CCACTCTGCA CATCTTGGCA ATTCCCCCAT CAACCCCTAT GGTGACTGCC GTCCAGGCTC CAGTGTCTCT GGAAAAGTCC TCCACTCCCC CCCCCCCCCC CCCCAACTGA
|
Protein sequence | MDELLPTHEP GTDFTKLYPV RSPNPGTGIE LAAKKLSYRT LLESQPLACP EKLYKALPYV AQLHCSHSTL HQSKLKRKLR NRDVPSCCKR NALKQKGNAK DSKSNVAKKQ RVPGKMTPPL QQQLPRQCPF PSPSTLHILA IPPSTPMVTA VQAPVSLEKS STPPPPPPN
|
| |